@base <http://purl.uniprot.org/uniprot/> .
@prefix annotation: <http://purl.uniprot.org/annotation/> .
@prefix citation: <http://purl.uniprot.org/citations/> .
@prefix dcterms: <http://purl.org/dc/terms/> .
@prefix disease: <http://purl.uniprot.org/diseases/> .
@prefix ECO: <http://purl.obolibrary.org/obo/ECO_> .
@prefix enzyme: <http://purl.uniprot.org/enzyme/> .
@prefix faldo: <http://biohackathon.org/resource/faldo#> .
@prefix foaf: <http://xmlns.com/foaf/0.1/> .
@prefix go: <http://purl.obolibrary.org/obo/GO_> .
@prefix isoform: <http://purl.uniprot.org/isoforms/> .
@prefix keyword: <http://purl.uniprot.org/keywords/> .
@prefix location: <http://purl.uniprot.org/locations/> .
@prefix owl: <http://www.w3.org/2002/07/owl#> .
@prefix position: <http://purl.uniprot.org/position/> .
@prefix pubmed: <http://purl.uniprot.org/pubmed/> .
@prefix range: <http://purl.uniprot.org/range/> .
@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix skos: <http://www.w3.org/2004/02/skos/core#> .
@prefix taxon: <http://purl.uniprot.org/taxonomy/> .
@prefix tissue: <http://purl.uniprot.org/tissues/> .
@prefix up: <http://purl.uniprot.org/core/> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .
<H5YQX6> rdf:type up:Protein ;
  up:reviewed false ;
  up:created "2012-04-18"^^xsd:date ;
  up:modified "2024-01-24"^^xsd:date ;
  up:version 33 ;
  up:mnemonic "H5YQX6_9BRAD" ;
  up:citation citation:SIP44CF5C799E3EFDA7 ;
  rdfs:seeAlso <http://purl.uniprot.org/embl-cds/EHR05514.1> ,
    <http://purl.uniprot.org/refseq/WP_007596286.1> ,
    <http://purl.uniprot.org/alphafolddb/H5YQX6> ,
    <http://purl.uniprot.org/geneid/66477740> ,
    <http://purl.uniprot.org/hogenom/CLU_158651_2_0_5> ,
    <http://purl.orthodb.org/odbgroup/9813793at2> ,
    <http://purl.uniprot.org/hamap/MF_00797> ,
    <http://purl.uniprot.org/interpro/IPR018753> ,
    <http://purl.uniprot.org/interpro/IPR046367> ,
    <http://purl.uniprot.org/pfam/PF10073> ;
  up:recommendedName <H5YQX6#SIP9855382F91EFC682> ;
  up:organism taxon:319017 ;
  up:encodedBy <H5YQX6#gene-MD5B0EB8A0E2DBDC513543C722517AAE136> ;
  up:annotation <H5YQX6#SIP7B2CCAEEC02AB007> ,
    <H5YQX6#SIP16C6F1C29D4C801C> ,
    <H5YQX6#SIP7354AD815CA15661> ;
  up:existence up:Inferred_from_Homology_Existence ;
  up:classifiedWith keyword:175 ,
    go:0003677 ;
  up:sequence isoform:H5YQX6-1 ;
  up:attribution <H5YQX6#attribution-BCD67FFDCAB6DDEA2C9B27B77B8BED1D> ,
    <H5YQX6#attribution-81ED1008866AC20A530234B9753B9A55> ,
    <H5YQX6#attribution-00503A19DE2E9BB882190368BB37342F> ,
    <H5YQX6#attribution-8F82647B63D853A6DB2B85192DA32F5E> ,
    <H5YQX6#attribution-F9EB60D08B2CEE8F2C910A517D44A921> ;
  up:proteome <http://purl.uniprot.org/proteomes/UP000005774#Chromosome> .
citation:SIP44CF5C799E3EFDA7 rdf:type up:Submission_Citation ;
  up:title "The Noncontiguous Finished sequence of Bradyrhizobium sp. WSM471." ;
  up:author "Lucas S." ,
    "Han J." ,
    "Lapidus A." ,
    "Cheng J.-F." ,
    "Goodwin L." ,
    "Pitluck S." ,
    "Peters L." ,
    "Lu M." ,
    "Detter J.C." ,
    "Han C." ,
    "Tapia R." ,
    "Land M." ,
    "Hauser L." ,
    "Kyrpides N." ,
    "Ivanova N." ,
    "Pagani I." ,
    "Brau L." ,
    "Yates R." ,
    "O'Hara G." ,
    "Rui T." ,
    "Howieson J." ,
    "Reeve W." ,
    "Woyke T." ;
  up:group "US DOE Joint Genome Institute" ;
  up:date "2011-11"^^xsd:gYearMonth ;
  up:submittedTo "EMBL/GenBank/DDBJ" .
<#_H5YQX6-citation-SIP44CF5C799E3EFDA7> rdf:type rdf:Statement ;
  rdf:subject <H5YQX6> ;
  rdf:predicate up:citation ;
  rdf:object citation:SIP44CF5C799E3EFDA7 ;
  rdf:type up:Citation_Statement ;
  up:scope "NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]" ;
  up:context <H5YQX6#context-MD5ED84FEBDE0156D77C1F17A58E2DAFE58> ;
  up:attribution <H5YQX6#attribution-F9EB60D08B2CEE8F2C910A517D44A921> .
<H5YQX6#context-MD5ED84FEBDE0156D77C1F17A58E2DAFE58> rdf:type up:Strain ;
  rdfs:label "WSM471" .
<#_FD25FCE888888B55_up.context_554B523E25583D18> rdf:type rdf:Statement ;
  rdf:subject <#_H5YQX6-citation-SIP44CF5C799E3EFDA7> ;
  rdf:predicate up:context ;
  rdf:object <H5YQX6#context-MD5ED84FEBDE0156D77C1F17A58E2DAFE58> ;
  up:attribution <H5YQX6#attribution-F9EB60D08B2CEE8F2C910A517D44A921> .
<http://purl.uniprot.org/embl-cds/EHR05514.1> rdf:type up:Nucleotide_Resource ;
  up:database <http://purl.uniprot.org/database/EMBL> ;
  up:locatedOn <http://purl.uniprot.org/embl/CM001442> .
<http://purl.uniprot.org/embl/CM001442> rdf:type up:Genomic_DNA .
<http://purl.uniprot.org/refseq/WP_007596286.1> rdf:type up:Resource ;
  up:database <http://purl.uniprot.org/database/RefSeq> ;
  up:translatedFrom <http://purl.uniprot.org/refseq/NZ_CM001442.1#WP_007596286.1_CDS> .
<http://purl.uniprot.org/refseq/NZ_CM001442.1#WP_007596286.1_CDS> up:locatedOn <http://purl.uniprot.org/refseq/NZ_CM001442.1> .
<http://purl.uniprot.org/alphafolddb/H5YQX6> rdf:type up:Resource ;
  up:database <http://purl.uniprot.org/database/AlphaFoldDB> .
<http://purl.uniprot.org/geneid/66477740> rdf:type up:Resource ;
  up:database <http://purl.uniprot.org/database/GeneID> .
<http://purl.uniprot.org/hogenom/CLU_158651_2_0_5> rdf:type up:Resource ;
  up:database <http://purl.uniprot.org/database/HOGENOM> .
<http://purl.orthodb.org/odbgroup/9813793at2> rdf:type up:Resource ;
  up:database <http://purl.uniprot.org/database/OrthoDB> .
<http://purl.uniprot.org/hamap/MF_00797> rdf:type up:Resource ;
  up:database <http://purl.uniprot.org/database/HAMAP> ;
  rdfs:comment "UPF0335" ;
  up:signatureSequenceMatch <http://purl.uniprot.org/isoforms/H5YQX6-1#HAMAP_MF_00797_match_1> .
<http://purl.uniprot.org/interpro/IPR018753> rdf:type up:Resource ;
  up:database <http://purl.uniprot.org/database/InterPro> ;
  rdfs:comment "GapR-like" .
<http://purl.uniprot.org/interpro/IPR046367> rdf:type up:Resource ;
  up:database <http://purl.uniprot.org/database/InterPro> ;
  rdfs:comment "GapR-like_DNA-bd" .
<http://purl.uniprot.org/pfam/PF10073> rdf:type up:Resource ;
  up:database <http://purl.uniprot.org/database/Pfam> ;
  rdfs:comment "GapR_DNA-bd" ;
  up:signatureSequenceMatch <http://purl.uniprot.org/isoforms/H5YQX6-1#Pfam_PF10073_match_1> .
<H5YQX6#SIP9855382F91EFC682> rdf:type up:Structured_Name ;
  up:fullName "UPF0335 protein Bra471DRAFT_06332" .
<#_0D122C155F8623C7_up.fullName_D454A0EB026FCE5F> rdf:type rdf:Statement ;
  rdf:subject <H5YQX6#SIP9855382F91EFC682> ;
  rdf:predicate up:fullName ;
  rdf:object "UPF0335 protein Bra471DRAFT_06332" ;
  up:attribution <H5YQX6#attribution-81ED1008866AC20A530234B9753B9A55> .
<#_kb.H5YQX6_up.organism_820F4A218CD9BBFB> rdf:type rdf:Statement ;
  rdf:subject <H5YQX6> ;
  rdf:predicate up:organism ;
  rdf:object taxon:319017 ;
  up:attribution <H5YQX6#attribution-F9EB60D08B2CEE8F2C910A517D44A921> .
<H5YQX6#gene-MD5B0EB8A0E2DBDC513543C722517AAE136> rdf:type up:Gene ;
  up:orfName "Bra471DRAFT_06332" .
<#_258FD83D592B11AF_up.orfName_61044583AB7418CA> rdf:type rdf:Statement ;
  rdf:subject <H5YQX6#gene-MD5B0EB8A0E2DBDC513543C722517AAE136> ;
  rdf:predicate up:orfName ;
  rdf:object "Bra471DRAFT_06332" ;
  up:attribution <H5YQX6#attribution-F9EB60D08B2CEE8F2C910A517D44A921> .
<H5YQX6#SIP7B2CCAEEC02AB007> rdf:type up:Similarity_Annotation ;
  rdfs:comment "Belongs to the UPF0335 family." .
<#_B1EC09042F10FDA6_rdfs.comment_1B405DB21BD3D88C> rdf:type rdf:Statement ;
  rdf:subject <H5YQX6#SIP7B2CCAEEC02AB007> ;
  rdf:predicate rdfs:comment ;
  rdf:object "Belongs to the UPF0335 family." ;
  up:attribution <H5YQX6#attribution-81ED1008866AC20A530234B9753B9A55> .
<H5YQX6#SIP16C6F1C29D4C801C> rdf:type up:Domain_Extent_Annotation ;
  rdfs:comment "GapR-like DNA-binding" ;
  up:range range:20324856056264238tt17tt88 .
range:20324856056264238tt17tt88 rdf:type faldo:Region ;
  faldo:begin position:20324856056264238tt17 ;
  faldo:end position:20324856056264238tt88 .
position:20324856056264238tt17 rdf:type faldo:Position ,
    faldo:ExactPosition ;
  faldo:position 17 ;
  faldo:reference isoform:H5YQX6-1 .
position:20324856056264238tt88 rdf:type faldo:Position ,
    faldo:ExactPosition ;
  faldo:position 88 ;
  faldo:reference isoform:H5YQX6-1 .
<#_kb.H5YQX6_up.annotation_939B0A44DC94EB48> rdf:type rdf:Statement ;
  rdf:subject <H5YQX6> ;
  rdf:predicate up:annotation ;
  rdf:object <H5YQX6#SIP16C6F1C29D4C801C> ;
  up:attribution <H5YQX6#attribution-8F82647B63D853A6DB2B85192DA32F5E> .
<H5YQX6#SIP7354AD815CA15661> rdf:type up:Coiled_Coil_Annotation ;
  up:range range:20324856056264238tt14tt48 .
range:20324856056264238tt14tt48 rdf:type faldo:Region ;
  faldo:begin position:20324856056264238tt14 ;
  faldo:end position:20324856056264238tt48 .
position:20324856056264238tt14 rdf:type faldo:Position ,
    faldo:ExactPosition ;
  faldo:position 14 ;
  faldo:reference isoform:H5YQX6-1 .
position:20324856056264238tt48 rdf:type faldo:Position ,
    faldo:ExactPosition ;
  faldo:position 48 ;
  faldo:reference isoform:H5YQX6-1 .
<#_kb.H5YQX6_up.annotation_C860A2B927548E0C> rdf:type rdf:Statement ;
  rdf:subject <H5YQX6> ;
  rdf:predicate up:annotation ;
  rdf:object <H5YQX6#SIP7354AD815CA15661> ;
  up:attribution <H5YQX6#attribution-00503A19DE2E9BB882190368BB37342F> .
<#_kb.H5YQX6_up.classifiedWith_EE51AB896D4279A9> rdf:type rdf:Statement ;
  rdf:subject <H5YQX6> ;
  rdf:predicate up:classifiedWith ;
  rdf:object keyword:175 ;
  up:attribution <H5YQX6#attribution-00503A19DE2E9BB882190368BB37342F> .
<#_kb.H5YQX6_up.classifiedWith_obo.GO_0003677> rdf:type rdf:Statement ;
  rdf:subject <H5YQX6> ;
  rdf:predicate up:classifiedWith ;
  rdf:object go:0003677 ;
  up:attribution <H5YQX6#attribution-BCD67FFDCAB6DDEA2C9B27B77B8BED1D> .
isoform:H5YQX6-1 rdf:type up:Simple_Sequence ;
  up:modified "2012-04-18"^^xsd:date ;
  up:version 1 ;
  up:mass 10245 ;
  up:md5Checksum "e8b3c5b119bbb52a830ef9a57a5d4ae7" ;
  rdf:value "MATSAAVRDDEPATKFAKDQLKSIIERIERLEEEKKAISDDIRDVFAEAKGNGYDVKALRTIVRMRKQDPNERAEAETILETYMQALGMI" .
<H5YQX6#attribution-BCD67FFDCAB6DDEA2C9B27B77B8BED1D> dcterms:creator <http://purl.uniprot.org/goa-projects/InterPro> ;
  up:evidence ECO:0007669 .
<H5YQX6#attribution-81ED1008866AC20A530234B9753B9A55> up:evidence ECO:0000256 ;
  up:source <http://purl.uniprot.org/hamap-rule/MF_00797> .
<H5YQX6#attribution-00503A19DE2E9BB882190368BB37342F> up:evidence ECO:0000256 ;
  up:source <http://purl.uniprot.org/sam/Coils> .
<H5YQX6#attribution-8F82647B63D853A6DB2B85192DA32F5E> up:evidence ECO:0000259 ;
  up:source <http://purl.uniprot.org/pfam/PF10073> .
<H5YQX6#attribution-F9EB60D08B2CEE8F2C910A517D44A921> up:evidence ECO:0000313 ;
  up:source <http://purl.uniprot.org/embl-cds/EHR05514.1> .