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<td id="blast-threshold">The expectation value (E) threshold is a statistical measure of the number of expected matches in a random database. The lower the e-value, the more likely the match is to be significant. E-values between 0.1 and 10 are generally dubious, and over 10 are unlikely to have biological significance. In all cases, those matches need to be verified manually. You may need to increase the E threshold if you have a very short query sequence, to detect very weak similarities, or similarities in a short region, or if your sequence has a low complexity region and you use the "filter" option</td><p><a href='/help/sequence-searches' target='_top'>More...</a></p>E-Thresholdi

<td id="blast-matrix">The matrix assigns a probability score for each position in an alignment. The BLOSUM matrix assigns a probability score for each position in an alignment that is based on the frequency with which that substitution is known to occur among consensus blocks within related proteins. BLOSUM62 is among the best of the available matrices for detecting weak protein similarities. The PAM set of matrices is also available. If "Auto" is set, the matrix will be selected depending on the query sequence length.</td><p><a href='/help/sequence-searches' target='_top'>More...</a></p>Matrixi

<td id="blast-filter">Low-complexity regions (e.g. stretches of cysteine in <a href="http://www.uniprot.org/uniprot/Q03751">Q03751</a>, or hydrophobic regions in membrane proteins) tend to produce spurious, insignificant matches with sequences in the database which have the same kind of low-complexity regions, but are unrelated biologically. If "Filter low complexity regions" is selected, the query sequence will be run through the program SEG, and all amino acids in low-complexity regions will be replaced by X's. </td><p><a href='/help/sequence-searches' target='_top'>More...</a></p>Filteringi

<td id="blast-gapped">This will allow gaps to be introduced in the sequences when the comparison is done.</td><p><a href='/help/sequence-searches' target='_top'>More...</a></p>Gappedi

<td id="blast-numal">Limits the number of returned alignments.</td><p><a href='/help/sequence-searches' target='_top'>More...</a></p>Hitsi

Sequence feature

Entry & position(s)Q8BJ42[673 - 673]
Description
Feature keyModified residue
Feature identifier
        10         20         30         40         50
MGTAQVLPGI LQKHCCILPD RNTESQCTLC GEPEEEEGGD LAQPGLSFPG
60 70 80 90 100
PAEEDIDQQY SWSPTQHFNE ERYSPAPRNM KGLTGSRNQP QLCAGHTCGL
110 120 130 140 150
SPPDDCEHPH DHMHHGSDVR QPYLLSPAES CPMDHHRCSP RSSVHSECMM
160 170 180 190 200
MPVMLGDHVS SSTFPRMHYS SHYDTRDDCA MSHTSTKVNR IPANLLDQFE
210 220 230 240 250
KQLPLHRDGF HTLQYQRASA ATEQRNESPG RIRHLVHSVQ KLFTKSHSLE
260 270 280 290 300
GSSKSNINGT KSDSRVDDHH QSHLSKHSKR SKSKERKPES KHKSGMSSWW
310 320 330 340 350
SSDDNLDSDS TYRTPSVAHR HHMDHIPHCY PEALQSPFGD LSLKTSKSNN
360 370 380 390 400
DVKCSACEGL ALTPDTRYMK RSSWSTLTVS QAKEAYRKSS LNLDKPLVHP
410 420 430 440 450
EIKPSLRPCH YLQVPQDDWG AYPTGGKEEE IPCRRMRSGS YIKAMGDEES
460 470 480 490 500
GESDSSPKTS PTVAIRPEPL LKPIIQRPLG DHQTQSYLQA ATEVPVGHSL
510 520 530 540 550
NPSINYNSPK FRSRNQSYMR AVSTLSQASC VSQMSEAEVN GQFESVCESV
560 570 580 590 600
FSEVESQAMD ALDLPGCFRT RSHSYLRAIQ AGYSQDDECI PVMTSSNMTS
610 620 630 640 650
TIRSTAAVSY TNYKKTPPPV PPRTTSKPLI SVTAQSSTES TQDAYQDSRA
660 670 680 690 700
QRMSPWPQDS RGGLYNSMDS LDSNKAMNLA LETAAAQRHA ADTQSSSTRS
710 720 730 740 750
IDKAVLASKA EELLKSRCSS IGVQDSEFPD HQPYPRSDVE TATDSDTESR
760 770 780 790 800
GLREYHSVGV QVEDEKRHGR FKRSNSVTAA VQADLELEGF PGHVSMEDKG
810 820 830 840 850
LQFGSSFQRH SEPSTPTQYG ALRTVRTQGL FSYREDYRTQ VDTSTLPPPD
860 870 880 890 900
PWLEPSLDTV ETGRMSPCRR DGSWFLKLLH TETKRMEGWC KEMEREAEEN
910 920 930 940 950
DLLEDILGKI RSAVGSAQLL MSQKFQQFYW LCQQNMDPSA MPRPTSQDLA
960 970 980 990 1000
GYWDMLQLSV EDVSMKFDEL HQLKLNDWKI IESPERKEER KIPPPIPKKP
1010 1020 1030 1040 1050
PKGKFPITRE KSLDLPDRQR QEARRRLMAA KRAASFRQNS ATERADSIEI

YIPEAQTRL
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