Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

Overview

StatusReference proteome
Proteinsi <p>Number of protein entries associated with this proteome: UniProtKB entries for regular proteomes or UniParc entries for redundant proteomes (<a href="/help/proteome_redundancy">more...</a>)</p> 2,862
Gene counti <p>This is the total number of unique genes found in the proteome set, algorithmically computed. For each gene, a single representative protein sequence is chosen from the proteome. Where possible, reviewed (Swiss-Prot) protein sequences are chosen as the representatives.</p> - Download one protein sequence per gene (FASTA)
Proteome IDi <p>The proteome identifier (UPID) is the unique identifier assigned to the set of proteins that constitute the <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a>. It consists of the characters ‘UP’ followed by 9 digits, is stable across releases and can therefore be used to cite a UniProt proteome.<p><a href='/help/proteome_id' target='_top'>More...</a></p>UP000001962
Taxonomy187272 - Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1)
StrainATCC BAA-1101 / DSM 17681 / MLHE-1
Last modifiedJuly 25, 2019
Genome assembly and annotationi <p>Identifier for the genome assembly (<a href="https://www.ensembl.org/Help/Faq?id=216">more...</a>)</p> GCA_000014785.1 from ENA/EMBL
Pan proteomei <p>A pan proteome is the full set of proteins thought to be expressed by a group of highly related organisms (e.g. multiple strains of the same bacterial species).<p><a href='/help/pan_proteomes' target='_top'>More...</a></p> This proteome is part of the Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) pan proteome (fasta)

An anaerobic, facultatively autotrophic arsenite oxidizing bacterium that respires nitrate or nitrite. The cells are short motile rods. It was isolated from bottom waters of Mono Lake, California USA, a stratified soda lake with high pH and high salt levels. It is a gamma-Proteobacterium located in the Ectothiorhodospira clade of photosynthetic bacteria that occur in soda lakes. However, strain MLHE-1 is not a phototroph, but does grow as an anaerobic chemoautotroph by linking oxidation of arsenite (As III), hydrogen, or sulfide to the reduction of nitrate. It contains Form 1 RuBisCo genes for fixation of CO2 during chemoautotrophic growth, but can also grow as a heterotroph on acetate either with nitrate or air. However, arsenite is only oxidized under anaerobic conditions. This strain is very likely to be helpful to our understanding of As-mobility in subsurface waters.

Componentsi <p>Genomic components encoding the proteome</p>

Component nameGenome Accession(s)
Proteins
Chromosome2862
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again