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Overview

Proteinsi <p>Number of protein entries associated with this proteome: UniProtKB entries for regular proteomes or UniParc entries for redundant proteomes (<a href="/help/proteome_redundancy">more...</a>)</p> 5,369
Gene counti <p>This is the total number of unique genes found in the proteome set, algorithmically computed. For each gene, a single representative protein sequence is chosen from the proteome. Where possible, reviewed (Swiss-Prot) protein sequences are chosen as the representatives.</p> - Download one protein sequence per gene (FASTA)
Proteome IDi <p>The proteome identifier (UPID) is the unique identifier assigned to the set of proteins that constitute the <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a>. It consists of the characters ‘UP’ followed by 9 digits, is stable across releases and can therefore be used to cite a UniProt proteome.<p><a href='/help/proteome_id' target='_top'>More...</a></p>UP000185422
Taxonomy562 - Escherichia coli
StrainSLK172
Last modifiedSeptember 28, 2019
Genome assembly and annotationi <p>Identifier for the genome assembly (<a href="https://www.ensembl.org/Help/Faq?id=216">more...</a>)</p> GCA_001936315.1 from ENA/EMBL
Pan proteomei <p>A pan proteome is the full set of proteins thought to be expressed by a group of highly related organisms (e.g. multiple strains of the same bacterial species).<p><a href='/help/pan_proteomes' target='_top'>More...</a></p> This proteome is part of the Escherichia coli (strain K12) pan proteome (fasta)

Componentsi <p>Genomic components encoding the proteome</p>

Component nameGenome Accession(s)
Proteins
Plasmid pslk172-1352
Plasmid pslk172-2121
Chromosome4969

Publications

  1. "Characterisation of two large plasmids containing ESBL genes; a novel disrupted mcr-1 gene and a lysogenized phage P-1 like sequence, cultured from a human atypical enteropathogenic Escherichia coli (aEPEC) recovered in China."
    Bai L., Wang J., Hurley D., Yu Z., Wang L., Chen Q., Li J., Li F., Fanning S.
    Submitted (OCT-2016) to the EMBL/GenBank/DDBJ databases
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Main funding by: National Institutes of Health

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