Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

Overview

Proteinsi <p>Number of protein entries associated with this proteome: UniProtKB entries for regular proteomes or UniParc entries for redundant proteomes (<a href="/help/proteome_redundancy">more...</a>)</p> 5,359
Gene counti <p>This is the total number of unique genes found in the proteome set, algorithmically computed. For each gene, a single representative protein sequence is chosen from the proteome. Where possible, reviewed (Swiss-Prot) protein sequences are chosen as the representatives.</p> - Download one protein sequence per gene (FASTA)
Proteome IDi <p>The proteome identifier (UPID) is the unique identifier assigned to the set of proteins that constitute the <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a>. It consists of the characters ‘UP’ followed by 9 digits, is stable across releases and can therefore be used to cite a UniProt proteome.<p><a href='/help/proteome_id' target='_top'>More...</a></p>UP000234906
Taxonomy562 - Escherichia coli
StrainCRE1540
Last modifiedSeptember 29, 2019
Genome assembly and annotationi <p>Identifier for the genome assembly (<a href="https://www.ensembl.org/Help/Faq?id=216">more...</a>)</p> GCA_002860085.1 from ENA/EMBL
Pan proteomei <p>A pan proteome is the full set of proteins thought to be expressed by a group of highly related organisms (e.g. multiple strains of the same bacterial species).<p><a href='/help/pan_proteomes' target='_top'>More...</a></p> This proteome is part of the Escherichia coli (strain K12) pan proteome (fasta)

Componentsi <p>Genomic components encoding the proteome</p>

Component nameGenome Accession(s)
Proteins
Plasmid p1540-4195
Plasmid p1540-186
Plasmid p1540-2178
Chromosome4855
Plasmid p1540-3121

Publications

  1. "Escherichia coli strain CRE1540 plasmid p1540-4, complete sequence."
    Ho P.L., Wang Y., Liu C.J., Lai E.L.Y., Chow K.H.
    Submitted (JAN-2017) to the EMBL/GenBank/DDBJ databases
  2. "Escherichia coli strain CRE1540 plasmid p1540-3, complete sequence."
    Ho P.L., Wang Y., Liu C.J., Lai E.L.Y., Chow K.H.
    Submitted (JAN-2017) to the EMBL/GenBank/DDBJ databases
  3. "Escherichia coli strain CRE1540 scaffold chromosome, complete sequence."
    Ho P.L., Wang Y., Liu C.J., Lai E.L.Y., Chow K.H.
    Submitted (JAN-2017) to the EMBL/GenBank/DDBJ databases
  4. "Escherichia coli strain CRE1540 plasmid p1540-1, complete sequence."
    Ho P.L., Wang Y., Liu C.J., Lai E.L.Y., Chow K.H.
    Submitted (JAN-2017) to the EMBL/GenBank/DDBJ databases
  5. "Escherichia coli strain CRE1540 plasmid p1540-2, complete sequence."
    Ho P.L., Wang Y., Liu C.J., Lai E.L.Y., Chow K.H.
    Submitted (JAN-2017) to the EMBL/GenBank/DDBJ databases
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again