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Entry version 37 (18 Sep 2019)
Sequence version 1 (09 Jul 2014)
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Protein
Submitted name:

IS607 family transposase

Gene

BB384_05835

Organism
Helicobacter pylori (Campylobacter pylori)
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/function_section">Function</a> section is used for enzymes and indicates the residues directly involved in catalysis.<p><a href='/help/act_site' target='_top'>More...</a></p>Active sitei72O-(5'-phospho-DNA)-serine intermediateUniRule annotation1

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
IS607 family transposaseImported
Submitted name:
IS607 transposaseImported
Submitted name:
ResolvaseImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
ORF Names:BB384_05835Imported, BB409_03605Imported, BB431_08110Imported, BGL75_03065Imported, BGL75_03125Imported, BGL75_03410Imported, BGL75_04775Imported, BGL82_05110Imported, BGL82_05320Imported, BGL82_05340Imported, BGL82_05355Imported, BGL82_07025Imported, BGL82_07950Imported, C2R50_02815Imported, C2R51_07045Imported, C2R57_03490Imported, C2R87_02740Imported, C2S04_08660Imported, C2S26_01215Imported, C2S44_00190Imported, DB320_08225Imported, DD754_00455Imported, DD767_08105Imported, DD779_08125Imported, DDP32_08140Imported, EC503_08025Imported, EDC13_05470Imported, EG63_01190Imported, EG63_07630Imported, EG63_07660Imported, EG63_07710Imported, HPPMSS1_c00124Imported, HPPMSS1_c00945Imported, HPPMSS1_c01126Imported, HPY499_07695Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiHelicobacter pylori (Campylobacter pylori)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri210 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiBacteriaProteobacteriaEpsilonproteobacteriaCampylobacteralesHelicobacteraceaeHelicobacter
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000244580 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Unassembled WGS sequence
  • UP000025233 Componenti: Chromosome
  • UP000268992 Componenti: Unassembled WGS sequence
  • UP000220198 Componenti: Unassembled WGS sequence
  • UP000244676 Componenti: Unassembled WGS sequence
  • UP000031018 Componenti: Unassembled WGS sequence
  • UP000270257 Componenti: Unassembled WGS sequence
  • UP000244777 Componenti: Unassembled WGS sequence
  • UP000277792 Componenti: Unassembled WGS sequence
  • UP000289502 Componenti: Chromosome
  • UP000271571 Componenti: Unassembled WGS sequence
  • UP000244746 Componenti: Unassembled WGS sequence
  • UP000244565 Componenti: Unassembled WGS sequence
  • UP000244684 Componenti: Unassembled WGS sequence
  • UP000220237 Componenti: Unassembled WGS sequence
  • UP000220331 Componenti: Unassembled WGS sequence
  • UP000219848 Componenti: Unassembled WGS sequence
  • UP000288916 Componenti: Unassembled WGS sequence
  • UP000271616 Componenti: Unassembled WGS sequence
  • UP000289001 Componenti: Unassembled WGS sequence
  • UP000220381 Componenti: Unassembled WGS sequence
  • UP000244339 Componenti: Unassembled WGS sequence

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

STRING: functional protein association networks

More...
STRINGi
1345592.CBOM010000044_gene1502

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini5 – 72HTH merR-typeInterPro annotationAdd BLAST68
Domaini64 – 210Resolvase/invertase-type recombinase catalyticInterPro annotationAdd BLAST147

Phylogenomic databases

Database of Orthologous Groups

More...
OrthoDBi
1442962at2

Family and domain databases

Conserved Domains Database

More...
CDDi
cd03769 SR_IS607_transposase_like, 1 hit

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
3.40.50.1390, 1 hit

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR009061 DNA-bd_dom_put_sf
IPR041718 IS607_transposase-like
IPR000551 MerR-type_HTH_dom
IPR006118 Recombinase_CS
IPR006119 Resolv_N
IPR036162 Resolvase-like_N_sf

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF00376 MerR, 1 hit
PF00239 Resolvase, 1 hit

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM00422 HTH_MERR, 1 hit
SM00857 Resolvase, 1 hit

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF46955 SSF46955, 1 hit
SSF53041 SSF53041, 1 hit

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS00552 HTH_MERR_1, 1 hit
PS50937 HTH_MERR_2, 1 hit
PS00397 RECOMBINASES_1, 1 hit
PS51736 RECOMBINASES_3, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

A0A024BYK2-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MNKRMLSIGQ ASKLLGVTIQ TLRNWDKKDL LKPDELTKGG ERRYKLESLR
60 70 80 90 100
RINRSVVFNQ DELKTIAYAR VSSHDQQDDL IRQVQVLELY CAKCGFNYEV
110 120 130 140 150
IQDLGSGMNY YKKGLTKLLN LILDNQVKRL VLTHKDRLLR FGAELVFSIC
160 170 180 190 200
EAKEVEVVII NKGDENVRFE EELAKDVLEI ITVFSARLYG SRSKKNKKLL
210
DEMQEVITNN VSYLNHA
Length:217
Mass (Da):25,111
Last modified:July 9, 2014 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i5B5C2C2B0E264DFA
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
CP007604 Genomic DNA Translation: AHZ26386.1
CP007604 Genomic DNA Translation: AHZ27524.1
CP007604 Genomic DNA Translation: AHZ27529.1
CP007604 Genomic DNA Translation: AHZ27537.1
AB889602 Genomic DNA Translation: BAO96701.1
AP017633 Genomic DNA Translation: BBI23667.1
AP017633 Genomic DNA Translation: BBI24488.1
AP017633 Genomic DNA Translation: BBI24669.1
JTDG01000050 Genomic DNA Translation: KHL89383.1
MILM01000066 Genomic DNA Translation: OPG44442.1
MILM01000051 Genomic DNA Translation: OPG45139.1
MILM01000047 Genomic DNA Translation: OPG45330.1
MILM01000047 Genomic DNA Translation: OPG45341.1
MILT01000137 Genomic DNA Translation: OPG54454.1
MILT01000129 Genomic DNA Translation: OPG55014.1
MILT01000104 Genomic DNA Translation: OPG56284.1
MILT01000103 Genomic DNA Translation: OPG56337.1
MILT01000102 Genomic DNA Translation: OPG56348.1
MILT01000098 Genomic DNA Translation: OPG56439.1
MBJY01000019 Genomic DNA Translation: PDW15903.1
MBGW01000040 Genomic DNA Translation: PDW45364.1
MBHV01000006 Genomic DNA Translation: PDW82644.1
QBPV01000151 Genomic DNA Translation: PUD16162.1
QBPI01000010 Genomic DNA Translation: PUD25855.1
QBPR01000007 Genomic DNA Translation: PUD32271.1
QBQF01000017 Genomic DNA Translation: PUD34829.1
QBRH01000022 Genomic DNA Translation: PUD55723.1
QBRN01000046 Genomic DNA Translation: PUD57803.1
QBRO01000015 Genomic DNA Translation: PUD76371.1
QELC01000036 Genomic DNA Translation: RKU88036.1
QDJD01000027 Genomic DNA Translation: RKU88513.1
QEGS01000002 Genomic DNA Translation: RKV38314.1
QEGY01000040 Genomic DNA Translation: RKV44234.1
QEHJ01000048 Genomic DNA Translation: RKV60663.1
RJGD01000039 Genomic DNA Translation: RVY89035.1
RJIY01000008 Genomic DNA Translation: RVZ93935.1

NCBI Reference Sequences

More...
RefSeqi
WP_001042546.1, NZ_RJIY01000008.1

Genome annotation databases

Ensembl bacterial and archaeal genome annotation project

More...
EnsemblBacteriai
AHZ26386; AHZ26386; EG63_01190
AHZ27524; AHZ27524; EG63_07630
AHZ27529; AHZ27529; EG63_07660
AHZ27537; AHZ27537; EG63_07710
KHL89383; KHL89383; HPY499_07695

Pathosystems Resource Integration Center (PATRIC)

More...
PATRICi
fig|210.1916.peg.1492

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP007604 Genomic DNA Translation: AHZ26386.1
CP007604 Genomic DNA Translation: AHZ27524.1
CP007604 Genomic DNA Translation: AHZ27529.1
CP007604 Genomic DNA Translation: AHZ27537.1
AB889602 Genomic DNA Translation: BAO96701.1
AP017633 Genomic DNA Translation: BBI23667.1
AP017633 Genomic DNA Translation: BBI24488.1
AP017633 Genomic DNA Translation: BBI24669.1
JTDG01000050 Genomic DNA Translation: KHL89383.1
MILM01000066 Genomic DNA Translation: OPG44442.1
MILM01000051 Genomic DNA Translation: OPG45139.1
MILM01000047 Genomic DNA Translation: OPG45330.1
MILM01000047 Genomic DNA Translation: OPG45341.1
MILT01000137 Genomic DNA Translation: OPG54454.1
MILT01000129 Genomic DNA Translation: OPG55014.1
MILT01000104 Genomic DNA Translation: OPG56284.1
MILT01000103 Genomic DNA Translation: OPG56337.1
MILT01000102 Genomic DNA Translation: OPG56348.1
MILT01000098 Genomic DNA Translation: OPG56439.1
MBJY01000019 Genomic DNA Translation: PDW15903.1
MBGW01000040 Genomic DNA Translation: PDW45364.1
MBHV01000006 Genomic DNA Translation: PDW82644.1
QBPV01000151 Genomic DNA Translation: PUD16162.1
QBPI01000010 Genomic DNA Translation: PUD25855.1
QBPR01000007 Genomic DNA Translation: PUD32271.1
QBQF01000017 Genomic DNA Translation: PUD34829.1
QBRH01000022 Genomic DNA Translation: PUD55723.1
QBRN01000046 Genomic DNA Translation: PUD57803.1
QBRO01000015 Genomic DNA Translation: PUD76371.1
QELC01000036 Genomic DNA Translation: RKU88036.1
QDJD01000027 Genomic DNA Translation: RKU88513.1
QEGS01000002 Genomic DNA Translation: RKV38314.1
QEGY01000040 Genomic DNA Translation: RKV44234.1
QEHJ01000048 Genomic DNA Translation: RKV60663.1
RJGD01000039 Genomic DNA Translation: RVY89035.1
RJIY01000008 Genomic DNA Translation: RVZ93935.1
RefSeqiWP_001042546.1, NZ_RJIY01000008.1

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Protein-protein interaction databases

STRINGi1345592.CBOM010000044_gene1502

Genome annotation databases

EnsemblBacteriaiAHZ26386; AHZ26386; EG63_01190
AHZ27524; AHZ27524; EG63_07630
AHZ27529; AHZ27529; EG63_07660
AHZ27537; AHZ27537; EG63_07710
KHL89383; KHL89383; HPY499_07695
PATRICifig|210.1916.peg.1492

Phylogenomic databases

OrthoDBi1442962at2

Family and domain databases

CDDicd03769 SR_IS607_transposase_like, 1 hit
Gene3Di3.40.50.1390, 1 hit
InterProiView protein in InterPro
IPR009061 DNA-bd_dom_put_sf
IPR041718 IS607_transposase-like
IPR000551 MerR-type_HTH_dom
IPR006118 Recombinase_CS
IPR006119 Resolv_N
IPR036162 Resolvase-like_N_sf
PfamiView protein in Pfam
PF00376 MerR, 1 hit
PF00239 Resolvase, 1 hit
SMARTiView protein in SMART
SM00422 HTH_MERR, 1 hit
SM00857 Resolvase, 1 hit
SUPFAMiSSF46955 SSF46955, 1 hit
SSF53041 SSF53041, 1 hit
PROSITEiView protein in PROSITE
PS00552 HTH_MERR_1, 1 hit
PS50937 HTH_MERR_2, 1 hit
PS00397 RECOMBINASES_1, 1 hit
PS51736 RECOMBINASES_3, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiA0A024BYK2_HELPX
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: A0A024BYK2
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: July 9, 2014
Last sequence update: July 9, 2014
Last modified: September 18, 2019
This is version 37 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Technical termi

Complete proteomeImported
UniProt is an ELIXIR core data resource
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