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Entry version 37 (13 Nov 2019)
Sequence version 1 (09 Jul 2014)
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Protein
Submitted name:

ABC transporter ATP-binding protein

Gene

dppF

Organism
Helicobacter pylori (Campylobacter pylori)
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein inferred from homologyi <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/function_section">Function</a> section describes a region in the protein which binds nucleotide phosphates. It always involves more than one amino acid and includes all residues involved in nucleotide-binding.<p><a href='/help/np_bind' target='_top'>More...</a></p>Nucleotide bindingi46 – 53ATPPROSITE-ProRule annotation8

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

Molecular functionHydrolaseImported
Biological processTransportSAAS annotation
LigandATP-bindingPROSITE-ProRule annotationSAAS annotationImported, Nucleotide-binding

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
ABC transporter ATP-binding proteinImported
Submitted name:
ATP-binding cassette domain-containing proteinImported
Submitted name:
Dipeptide transport system ATP-binding proteinImported (EC:3.6.3.-Imported)
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:dppFImported
ORF Names:AM496_00660Imported, AM497_01805Imported, BB395_01935Imported, BB396_05025Imported, BGL60_05620Imported, C2R45_05850Imported, C2R64_02630Imported, C2R72_05975Imported, C2R94_00275Imported, C2S04_05010Imported, C2S37_01850Imported, C2S39_06735Imported, C2S41_00485Imported, C2S43_07165Imported, CV727_06095Imported, D8X56_01595Imported, DD777_01375Imported, DD778_01245Imported, DD794_01665Imported, DDP42_01450Imported, EC525_00925Imported, EC598_00065Imported, ECB90_03740Imported, ECC11_00385Imported, ECC16_00390Imported, ECC23_06040Imported, ECC27_00370Imported, ECC31_01565Imported, ECC39_01545Imported, EG63_01565Imported, HPY1846_03830Imported, NCTC12823_00459Imported, NCTC13207_00971Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiHelicobacter pylori (Campylobacter pylori)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri210 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiBacteriaProteobacteriaEpsilonproteobacteriaCampylobacteralesHelicobacteraceaeHelicobacter
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000244706 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Unassembled WGS sequence
  • UP000288996 Componenti: Unassembled WGS sequence
  • UP000288817 Componenti: Unassembled WGS sequence
  • UP000037689 Componenti: Unassembled WGS sequence
  • UP000282660 Componenti: Unassembled WGS sequence
  • UP000220720 Componenti: Unassembled WGS sequence
  • UP000244618 Componenti: Unassembled WGS sequence
  • UP000244700 Componenti: Unassembled WGS sequence
  • UP000031912 Componenti: Unassembled WGS sequence
  • UP000244769 Componenti: Unassembled WGS sequence
  • UP000244746 Componenti: Unassembled WGS sequence
  • UP000278691 Componenti: Unassembled WGS sequence
  • UP000289015 Componenti: Unassembled WGS sequence
  • UP000244465 Componenti: Unassembled WGS sequence
  • UP000288768 Componenti: Unassembled WGS sequence
  • UP000244453 Componenti: Unassembled WGS sequence
  • UP000220089 Componenti: Unassembled WGS sequence
  • UP000271607 Componenti: Chromosome
  • UP000275152 Componenti: Unassembled WGS sequence
  • UP000288755 Componenti: Unassembled WGS sequence
  • UP000025233 Componenti: Chromosome
  • UP000276419 Componenti: Unassembled WGS sequence
  • UP000219991 Componenti: Unassembled WGS sequence
  • UP000318822 Componenti: Chromosome
  • UP000288732 Componenti: Unassembled WGS sequence
  • UP000288923 Componenti: Unassembled WGS sequence
  • UP000288834 Componenti: Unassembled WGS sequence
  • UP000254357 Componenti: Unassembled WGS sequence
  • UP000037777 Componenti: Unassembled WGS sequence
  • UP000280151 Componenti: Chromosome 1
  • UP000244849 Componenti: Unassembled WGS sequence
  • UP000244341 Componenti: Unassembled WGS sequence
  • UP000288796 Componenti: Unassembled WGS sequence

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

STRING: functional protein association networks

More...
STRINGi
1345592.CBOM010000001_gene178

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini4 – 253ABC transporterInterPro annotationAdd BLAST250

<p>This subsection of the ‘Family and domains’ section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Belongs to the ABC transporter superfamily.SAAS annotation

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
ENOG4108JQ7 Bacteria
COG4608 LUCA

Database of Orthologous Groups

More...
OrthoDBi
1303270at2

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR003593 AAA+_ATPase
IPR003439 ABC_transporter-like
IPR017871 ABC_transporter_CS
IPR013563 Oligopep_ABC_C
IPR027417 P-loop_NTPase

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF00005 ABC_tran, 1 hit
PF08352 oligo_HPY, 1 hit

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM00382 AAA, 1 hit

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF52540 SSF52540, 1 hit

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS00211 ABC_TRANSPORTER_1, 1 hit
PS50893 ABC_TRANSPORTER_2, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

A0A024BZ44-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MKLLEIKELK KSYAIDRGLF KPKRIIHALN GISFEVEQNE VLSIVGESGC
60 70 80 90 100
GKSTTAKILA GIERQDSGAI YFNGKRHLHF SKQDWFDYRK KVQMIFQDPY
110 120 130 140 150
SSLNPRWKVG EIIAEPLLLN SHFSKKEIKT KVLEIMQKVG LKLEWIDRYP
160 170 180 190 200
HQFSGGQRQR IGIARALILH PSVVICDEPV SALDVSIQAQ VLNLLLDLQK
210 220 230 240 250
EMGLTYIFIS HDLGVVEHIS DKIIVMNQGQ IVETGDVDSV ISAPKHPYTQ
260
KLLNAVPHLE KSMQRFAK
Length:268
Mass (Da):30,453
Last modified:July 9, 2014 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i2B18A0925B9F8081
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
CP007604 Genomic DNA Translation: AHZ26458.1
CP034314 Genomic DNA Translation: AZL51863.1
JSXV01000023 Genomic DNA Translation: KHL83034.1
LIXG01000006 Genomic DNA Translation: KOS34529.1
LIXH01000005 Genomic DNA Translation: KOS35127.1
MIKX01000061 Genomic DNA Translation: OPG19491.1
MBJX01000017 Genomic DNA Translation: PDW10676.1
MBIE01000024 Genomic DNA Translation: PDW95111.1
QBPJ01000046 Genomic DNA Translation: PUB95693.1
QBPL01000007 Genomic DNA Translation: PUB97964.1
QBPM01000052 Genomic DNA Translation: PUB99654.1
QBPN01000017 Genomic DNA Translation: PUD07247.1
QBPV01000062 Genomic DNA Translation: PUD18916.1
QBPZ01000004 Genomic DNA Translation: PUD28759.1
QBQT01000360 Genomic DNA Translation: PUD75567.1
QBRB01000055 Genomic DNA Translation: PUD77252.1
QBRT01000112 Genomic DNA Translation: PUD85125.1
CP024949 Genomic DNA Translation: QDY59579.1
QDJI01000002 Genomic DNA Translation: RKV01417.1
QEGX01000005 Genomic DNA Translation: RKV45587.1
QEHC01000006 Genomic DNA Translation: RKV52148.1
QEHI01000007 Genomic DNA Translation: RKV60585.1
RJEB01000003 Genomic DNA Translation: RVY08758.1
RJEN01000001 Genomic DNA Translation: RVY24732.1
RJES01000001 Genomic DNA Translation: RVY31350.1
RJFC01000001 Genomic DNA Translation: RVY45702.1
RJEY01000030 Genomic DNA Translation: RVY49652.1
RJFG01000002 Genomic DNA Translation: RVY55009.1
RJFO01000002 Genomic DNA Translation: RVY70169.1
RJGS01000001 Genomic DNA Translation: RVZ11827.1
RJIR01000001 Genomic DNA Translation: RVZ89502.1
UGHN01000001 Genomic DNA Translation: STO73972.1
LR134519 Genomic DNA Translation: VEJ25400.1

NCBI Reference Sequences

More...
RefSeqi
WP_000770450.1, NZ_VEXW01000003.1

Genome annotation databases

Ensembl bacterial and archaeal genome annotation project

More...
EnsemblBacteriai
AHZ26458; AHZ26458; EG63_01565
KHL83034; KHL83034; HPY1846_03830
KOS34529; KOS34529; AM497_01805
KOS35127; KOS35127; AM496_00660

Pathosystems Resource Integration Center (PATRIC)

More...
PATRICi
fig|210.1916.peg.307

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP007604 Genomic DNA Translation: AHZ26458.1
CP034314 Genomic DNA Translation: AZL51863.1
JSXV01000023 Genomic DNA Translation: KHL83034.1
LIXG01000006 Genomic DNA Translation: KOS34529.1
LIXH01000005 Genomic DNA Translation: KOS35127.1
MIKX01000061 Genomic DNA Translation: OPG19491.1
MBJX01000017 Genomic DNA Translation: PDW10676.1
MBIE01000024 Genomic DNA Translation: PDW95111.1
QBPJ01000046 Genomic DNA Translation: PUB95693.1
QBPL01000007 Genomic DNA Translation: PUB97964.1
QBPM01000052 Genomic DNA Translation: PUB99654.1
QBPN01000017 Genomic DNA Translation: PUD07247.1
QBPV01000062 Genomic DNA Translation: PUD18916.1
QBPZ01000004 Genomic DNA Translation: PUD28759.1
QBQT01000360 Genomic DNA Translation: PUD75567.1
QBRB01000055 Genomic DNA Translation: PUD77252.1
QBRT01000112 Genomic DNA Translation: PUD85125.1
CP024949 Genomic DNA Translation: QDY59579.1
QDJI01000002 Genomic DNA Translation: RKV01417.1
QEGX01000005 Genomic DNA Translation: RKV45587.1
QEHC01000006 Genomic DNA Translation: RKV52148.1
QEHI01000007 Genomic DNA Translation: RKV60585.1
RJEB01000003 Genomic DNA Translation: RVY08758.1
RJEN01000001 Genomic DNA Translation: RVY24732.1
RJES01000001 Genomic DNA Translation: RVY31350.1
RJFC01000001 Genomic DNA Translation: RVY45702.1
RJEY01000030 Genomic DNA Translation: RVY49652.1
RJFG01000002 Genomic DNA Translation: RVY55009.1
RJFO01000002 Genomic DNA Translation: RVY70169.1
RJGS01000001 Genomic DNA Translation: RVZ11827.1
RJIR01000001 Genomic DNA Translation: RVZ89502.1
UGHN01000001 Genomic DNA Translation: STO73972.1
LR134519 Genomic DNA Translation: VEJ25400.1
RefSeqiWP_000770450.1, NZ_VEXW01000003.1

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Protein-protein interaction databases

STRINGi1345592.CBOM010000001_gene178

Genome annotation databases

EnsemblBacteriaiAHZ26458; AHZ26458; EG63_01565
KHL83034; KHL83034; HPY1846_03830
KOS34529; KOS34529; AM497_01805
KOS35127; KOS35127; AM496_00660
PATRICifig|210.1916.peg.307

Phylogenomic databases

eggNOGiENOG4108JQ7 Bacteria
COG4608 LUCA
OrthoDBi1303270at2

Family and domain databases

InterProiView protein in InterPro
IPR003593 AAA+_ATPase
IPR003439 ABC_transporter-like
IPR017871 ABC_transporter_CS
IPR013563 Oligopep_ABC_C
IPR027417 P-loop_NTPase
PfamiView protein in Pfam
PF00005 ABC_tran, 1 hit
PF08352 oligo_HPY, 1 hit
SMARTiView protein in SMART
SM00382 AAA, 1 hit
SUPFAMiSSF52540 SSF52540, 1 hit
PROSITEiView protein in PROSITE
PS00211 ABC_TRANSPORTER_1, 1 hit
PS50893 ABC_TRANSPORTER_2, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiA0A024BZ44_HELPX
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: A0A024BZ44
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: July 9, 2014
Last sequence update: July 9, 2014
Last modified: November 13, 2019
This is version 37 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Complete proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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