Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Entry version 10 (31 Jul 2019)
Sequence version 1 (28 Mar 2018)
Previous versions | rss
Help videoAdd a publicationFeedback
Protein
Submitted name:

Uncharacterized protein

Gene

SYCP2

Organism
Rhinopithecus bieti (Black snub-nosed monkey) (Pygathrix bieti)
Status
Unreviewed-Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
Uncharacterized proteinImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:SYCP2Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiRhinopithecus bieti (Black snub-nosed monkey) (Pygathrix bieti)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri61621 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniCercopithecidaeColobinaeRhinopithecus
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000233180 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Unplaced

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte & Seán O’Donoghue; Source: COMPARTMENTS

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

GO - Molecular functioni

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini10 – 180SYCP2_ARLDInterPro annotationAdd BLAST171
Domaini250 – 331SYCP2_SLDInterPro annotationAdd BLAST82

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni380 – 414DisorderedSequence analysisAdd BLAST35
Regioni439 – 494DisorderedSequence analysisAdd BLAST56
Regioni592 – 616DisorderedSequence analysisAdd BLAST25
Regioni632 – 657DisorderedSequence analysisAdd BLAST26
Regioni697 – 722DisorderedSequence analysisAdd BLAST26
Regioni903 – 941DisorderedSequence analysisAdd BLAST39

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi395 – 413PolarSequence analysisAdd BLAST19
Compositional biasi457 – 479PolarSequence analysisAdd BLAST23
Compositional biasi637 – 657PolarSequence analysisAdd BLAST21
Compositional biasi707 – 722PolyampholyteSequence analysisAdd BLAST16
Compositional biasi924 – 938PolarSequence analysisAdd BLAST15

Phylogenomic databases

Ensembl GeneTree

More...
GeneTreei
ENSGT00530000063859

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR024835 SYCP1/2
IPR024832 SYCP2
IPR041322 SYCP2_ARLD
IPR040560 SYCP2_SLD

The PANTHER Classification System

More...
PANTHERi
PTHR15607 PTHR15607, 2 hits
PTHR15607:SF12 PTHR15607:SF12, 2 hits

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF18581 SYCP2_ARLD, 1 hit
PF18584 SYCP2_SLD, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

A0A2K6MUH3-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MPIRPDLQQL EKCIDDALRK NDFKPLKTLL QIDICEDVKI KCSKQFFHKV
60 70 80 90 100
DNLICRELNK EDIHNVSAIL VSVGRCGKNI SVLGQAGLLT MIKQGLIQKI
110 120 130 140 150
SIEYEIIQSQ GNSKDEAVLN MIEDLIDLLL VIHDVSDEGK KQVVESFVPR
160 170 180 190 200
ICSLVIDSRV NICIQQEIIK KMNAMLDKMP QDARKILSNQ EMLILIMTTE
210 220 230 240 250
KQRQELAHQW FSMDFIAKAF KRIKNSEFET DCRIFLNLIQ PFTDKELELK
260 270 280 290 300
NEKLEEFWID FNLGSQTLSF YIAGDNDDHQ WEAVTVPEEN VICLYTVRES
310 320 330 340 350
KNKISKREGK ELLLYFDASL EITNVTQKIF GANKHRESIR KQGISVAKTS
360 370 380 390 400
LHILFDASGS QILVPESQIS PVRELVSLKE KSKSPKEFAK PSKYIKNSNE
410 420 430 440 450
GNRNDSQLEI ITPSKRKMSE ASMIVSGADR YTMRSPVLFS NTSIPPRRRR
460 470 480 490 500
IKPPLQMTSS AEKSSVSQTS ENGVDNAASL KSRPSEERYR RDNTDKHIKT
510 520 530 540 550
AKCVENTENM NVEFPNQNFN ELQDVIPDSQ AVEKRDHTAL PGVLDNISGN
560 570 580 590 600
KMHSKWACWT PVTNIELCNN QRASTSSGDT FNQDIVINKK LTKQKSSSSI
610 620 630 640 650
SDHNSEETGK VKYKEERTDH LKIDKAEVEV CKKHNQQQNH PKYSGQKSTE
660 670 680 690 700
NAKQSDWPVE SETTFKSVLL NKTIEESLIY RKKCILSKDV NTATCDKNPS
710 720 730 740 750
ASKNLQSHRK AGKELTSELN SWDLKPKKMR EKSKGKEFTH AAKSLISQIN
760 770 780 790 800
KRYKTNDDIK STRKLKESLI NSGFSNKSVV QLSKEKIQKK SYRKLKTTFV
810 820 830 840 850
NVTSECPLND VYNFNLNGAD DPIIKLGIQE FQATAKEACA DKSIRLVGPR
860 870 880 890 900
NHDELKSSVK TKDKKIITNH QKKNLFSDTE TEYRCDDSKT DISWLREPKS
910 920 930 940 950
KPQLIDYSRN KNVKNHKSGK SRSSLEKGQP SSKMVSQEMD KTVPEGRIRL
960 970 980 990 1000
PRKATKTKKN YKDLSNSESE CEQEFSHSFK ENLLVKEENI HSRMKTVKLP
1010 1020 1030 1040 1050
KKQQKVFRAE TEEELSKHWK NSCLLKDTIR DNCLDLSPRS LSGSPSSIEV
1060 1070 1080 1090 1100
TRCVEKITEK DFTQDYDCIT KSVSPYPKTS SLESLNSNSG VGENFLCASE
1110 1120 1130 1140 1150
SCSPIPRPLF LPRHTPTKSN TIVNRKKKSS LVLTQETQNH NSYSDASSYS
1160 1170 1180 1190 1200
SEKRFMEIES PNINENYIQS KREESHSASS LSKSCEGREK TWFDMPCDAT
1210 1220 1230 1240 1250
HVSGPTQHLG RKRIYIEDNL SSSNEVEMEV KGERRANLLA KKLCKIEDAD
1260 1270 1280 1290 1300
HHIHKMSESI SSLSTNDFSI PWETWQNEFA GIEMTYETYE RLHLLKTSLA
1310 1320 1330 1340 1350
KSVFCTTDNE ETIFTSEMCL MKEDMKVLQD RLLKDMLEEE LLNVRRELMS
1360
VFMSHEKNVN V
Length:1,361
Mass (Da):155,732
Last modified:March 28, 2018 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i67B45F23872CE176
GO

Genome annotation databases

Ensembl eukaryotic genome annotation project

More...
Ensembli
ENSRBIT00000063451; ENSRBIP00000039426; ENSRBIG00000043163

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSRBIT00000063451; ENSRBIP00000039426; ENSRBIG00000043163

Phylogenomic databases

GeneTreeiENSGT00530000063859

Family and domain databases

InterProiView protein in InterPro
IPR024835 SYCP1/2
IPR024832 SYCP2
IPR041322 SYCP2_ARLD
IPR040560 SYCP2_SLD
PANTHERiPTHR15607 PTHR15607, 2 hits
PTHR15607:SF12 PTHR15607:SF12, 2 hits
PfamiView protein in Pfam
PF18581 SYCP2_ARLD, 1 hit
PF18584 SYCP2_SLD, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiA0A2K6MUH3_RHIBE
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: A0A2K6MUH3
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: March 28, 2018
Last sequence update: March 28, 2018
Last modified: July 31, 2019
This is version 10 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again