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Entry version 7 (11 Dec 2019)
Sequence version 1 (13 Feb 2019)
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Protein
Submitted name:

Uncharacterized protein

Gene

ALP51_01390

Organism
Pseudomonas savastanoi (Pseudomonas syringae pv. savastanoi)
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
Uncharacterized proteinImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
ORF Names:ALP51_01390Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiPseudomonas savastanoi (Pseudomonas syringae pv. savastanoi)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri29438 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000278180 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Unassembled WGS sequence

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Cellular componenti

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni77 – 142DisorderedSequence analysisAdd BLAST66
Regioni164 – 190DisorderedSequence analysisAdd BLAST27
Regioni212 – 238DisorderedSequence analysisAdd BLAST27
Regioni260 – 286DisorderedSequence analysisAdd BLAST27
Regioni308 – 334DisorderedSequence analysisAdd BLAST27
Regioni356 – 436DisorderedSequence analysisAdd BLAST81

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi356 – 373PolarSequence analysisAdd BLAST18
Compositional biasi398 – 436PolarSequence analysisAdd BLAST39

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR000258 Ice_nucleatn
IPR040231 InaK

The PANTHER Classification System

More...
PANTHERi
PTHR31294:SF8 PTHR31294:SF8, 8 hits

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF00818 Ice_nucleation, 15 hits

Protein Motif fingerprint database; a protein domain database

More...
PRINTSi
PR00327 ICENUCLEATN

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS00314 ICE_NUCLEATION, 15 hits

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

A0A3M5KH07-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MMHRASYSST SPPAAVEVRP ASGELVVSHE VFDVASVSAP VGAEGNLPAV
60 70 80 90 100
TTQTLQTATY GSTLIGDSHS QLVAGYGSTE TAGSHSDLTA GYGSTGTAGS
110 120 130 140 150
DSSLTAGYGS TQTSGSDSSL RAGYGSTQTA QEGSNLTAGY GSTGTAGSDS
160 170 180 190 200
SLIAGYGSTQ TSGGDSALTA GYGSTQTAQE GSNLTAGYGS TGTAGADSSL
210 220 230 240 250
IAGYGSTQTS GSDSALTAGY GSTQTAQEGS NLTAGYGSTG TAGSDSSLIA
260 270 280 290 300
GYGSTQTSGG DSALTAGYGS TQTAQEGSNL TAGYGSTGTA GSDSSLIAGY
310 320 330 340 350
GSTQTSGSDS ALTAGYGSTQ TAQEGSNLTA GYGSTGTAGS DSSLIAGYGS
360 370 380 390 400
TQTSGGDSAL TAGYGSTQTA QEGXXXXXXX XXXXXXXXXX XAGSDSSLIA
410 420 430 440 450
GYGSTQTSGG DSSLTAGYGS TQTAQEGSNL TAGYGSTGTA GSDSSLIAGY
460 470 480 490 500
GSTQTSGSGS SLTAGYGSTQ TAREGSTLTA GYGSTGTAGA DSSLIAGYGS
510 520 530 540 550
TQTAGADSNL TAGYGSTGTA GHESFIIAGY GSTQTAGHKS ILTAGYGSTQ
560 570 580 590 600
TARDGSDLIA GYGCTGTAGS GSSLIAGYGS TQTASYRSML TAGYGSTQTA
610 620 630 640 650
REYSDLVAGY GSTSTAGSNS SLIAGYGSTQ TASFKSILTA GYGSTQTAQE
660 670 680 690 700
RSDLVTGYGS TSTAGYASSL IAGYGSTQTA GYESTLTAGY GSTQTAQDSS
710 720 730 740 750
SLTTGYGSTS TAGYASSLIA GYGSTQTAGY ESTLTAGYGS TQTAQERSDL
760 770 780 790 800
VTGYGSTSTA GYASSLIAGY GSTQTAGYES TLTAGYGSTQ TAQEKSSLTT
810 820 830 840 850
GYGSTSTAGY ESSLIAGYGS TQTAGYKSTL TAGYGSTQTA EHGSSLTAGY
860 870 880 890 900
GSTATAGQDS SLIAGYGSSL TSGIRSFLTA GYGSTLIAGL RSVLIAGYGS
910 920 930 940 950
SLTSGIRSTL TAGYGSNQIA SYGSSLIAGH ESIQVAGHKS MLIAGKGSSQ
960 970 980 990 1000
TAGFRSTLIA GAGSVQLAGD RSRLIAGADS NQTAGDRSKL LAGNNSYLTA
1010 1020 1030 1040 1050
GDRSKLTGGH DCTLMAGDQS RLTAGKNSVL TAGARSKLIG SEGSTLSAGE
1060 1070 1080 1090
DSTLVFRLWD GKRYRQLVAR TGENGIEADI PYYVNDDDDI VNKTDEDDT
Length:1,099
Mass (Da):107,262
Last modified:February 13, 2019 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iA644DAF0262E19DE
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
RBTE01000072 Genomic DNA Translation: RMT34692.1

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
RBTE01000072 Genomic DNA Translation: RMT34692.1

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

Family and domain databases

InterProiView protein in InterPro
IPR000258 Ice_nucleatn
IPR040231 InaK
PANTHERiPTHR31294:SF8 PTHR31294:SF8, 8 hits
PfamiView protein in Pfam
PF00818 Ice_nucleation, 15 hits
PRINTSiPR00327 ICENUCLEATN
PROSITEiView protein in PROSITE
PS00314 ICE_NUCLEATION, 15 hits

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiA0A3M5KH07_PSESS
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: A0A3M5KH07
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: February 13, 2019
Last sequence update: February 13, 2019
Last modified: December 11, 2019
This is version 7 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)
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