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UniProtKB - A5GXQ1 (A5GXQ1_MORAM)

Entry version 38 (31 Jul 2019)
Sequence version 1 (12 Jun 2007)
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Protein
Submitted name:

Vitellogenin A

Gene
N/A
Organism
Morone americana (White perch) (Roccus americanus)
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>-Experimental evidence at transcript leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

Complete GO annotation on QuickGO ...

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
Vitellogenin AImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiMorone americana (White perch) (Roccus americanus)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri46260 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Actinopterygii › Neopterygii › Teleostei › Neoteleostei › Acanthomorphata › Eupercaria › Moronidae › Morone

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section denotes the presence of an N-terminal signal peptide.<p><a href='/help/signal' target='_top'>More...</a></p>Signal peptidei1 – 15Sequence analysisAdd BLAST15
<p>This subsection of the ‘PTM / Processing’ section describes the extent of a polypeptide chain in the mature protein following processing.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_501236160216 – 1667Sequence analysisAdd BLAST1652

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini24 – 662VitellogeninInterPro annotationAdd BLAST639
Domaini1398 – 1603VWFDInterPro annotationAdd BLAST206

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni1075 – 1154DisorderedSequence analysisAdd BLAST80

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi1075 – 1152PolarSequence analysisAdd BLAST78

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Domaini

SignalSequence analysis

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

More...Gene3Di		1.25.10.20, 1 hit
2.20.50.20, 1 hit
2.20.90.10, 1 hit
2.30.230.10, 1 hit

Integrated resource of protein families, domains and functional sites

More...InterProi		View protein in InterPro
IPR015819 Lipid_transp_b-sht_shell
IPR001747 Lipid_transpt_N
IPR011030 Lipovitellin_superhlx_dom
IPR015816 Vitellinogen_b-sht_N
IPR015258 Vitellinogen_b-sht_shell
IPR037088 Vitellinogen_b-sht_shell_sf
IPR015255 Vitellinogen_open_b-sht
IPR015817 Vitellinogen_open_b-sht_sub1
IPR001846 VWF_type-D

Pfam protein domain database

More...Pfami		View protein in Pfam
PF09172 DUF1943, 1 hit
PF09175 DUF1944, 1 hit
PF01347 Vitellogenin_N, 1 hit
PF00094 VWD, 1 hit

Simple Modular Architecture Research Tool; a protein domain database

More...SMARTi		View protein in SMART
SM01169 DUF1943, 1 hit
SM01170 DUF1944, 1 hit
SM00638 LPD_N, 1 hit
SM00216 VWD, 1 hit

Superfamily database of structural and functional annotation

More...SUPFAMi		SSF48431 SSF48431, 1 hit
SSF56968 SSF56968, 3 hits

PROSITE; a protein domain and family database

More...PROSITEi		View protein in PROSITE
PS51211 VITELLOGENIN, 1 hit
PS51233 VWFD, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

A5GXQ1-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MRVVVLALTL ALVAGQLHNL APEFDAGKTY VYKYEALLLG GLPEEGLAKA 
        60         70         80         90        100
GLKVSSKVLI SAAAQNIYML KLVEPELFEY SGIWPKDPLV PATKLTSALA 
       110        120        130        140        150
AQLMIPIKFE YANGVVGKMF APEGISTMVL NVHRGILNVL QLNIKKTQNV 
       160        170        180        190        200
YELQEAGAQG VCKTLYAITE DDKAERILLT KTRDLNHCQE KIIKDLGLAY 
       210        220        230        240        250
TEKCAKCQQD SKNLRGATAY NYILKPVASG ILILEAAVNE LIQFSPFTEL 
       260        270        280        290        300
NGAAQMQTKQ SLVFLEIQRA TILPNEAQYL HRGSLKYEFS TELLQTPIQL 
       310        320        330        340        350
IKINNVQAQI VEILNHLVTN NVERVHEDAP LKFLELIQLL RAARFEDLEM 
       360        370        380        390        400
LWRQHRLKPT FRQWILDSIP AIGTPVALRF IKEKFLLDDL TVAEVAQALI 
       410        420        430        440        450
ASIHMVTANT EAIKLVEALA INSKIVESPV LREIVLLGYG TMISKHCVEL 
       460        470        480        490        500
AVCPAELIRP IQDLLAEAVA KDEIQDIILL VKVLGNAGQA TSLKPITRIL 
       510        520        530        540        550
PIHGTAAASL PMKVHANAIM ALRNIAKKEP RMIQELALQL YMDKALHPEL 
       560        570        580        590        600
RMLASIVLFE TRPAMGLVTT LANIVKTEEN LQVASFLYSH MKSLTRSTAA 
       610        620        630        640        650
IHASVAAACN IAIKILSPKL NRLSFRFSKA IHVDIYNSPL MLGAAASAFY 
       660        670        680        690        700
INDAATILPR SIVAKTSAYL AGAAADVLEV GVRTEGLQEA LLKNPALIDN 
       710        720        730        740        750
ADRMTKMKCV IKALSDLRSL PSSTPLASVY VKFFGQEIAF ANIDKALIDK 
       760        770        780        790        800
LATGPSVQTV GRNALNALLS GASFHFVKPL LATEVRRIMP TAAGLPMELS 
       810        820        830        840        850
LYTAAVAAAA VQVRATTTPA LPENFHFAQL LKTDIQLETE IRPSIAVNTF 
       860        870        880        890        900
AAMGVNTAIL QAALLSRAKL NSIVPAKITA RLNIKEGHFK IEALPVSVPE 
       910        920        930        940        950
HVAAVHVETF AVARNIEDLA AARITPIIPA KILQTISREI LTSKISSSVA 
       960        970        980        990       1000
DSWSQSSEII HEDVAVKPII KSKAAQFEKK YCAKAVAIGL KGCFKITCEH 
      1010       1020       1030       1040       1050
AAFISDIALY KLAGRHSVAL SLKPIEGEAI ESLEIEVQVG PKAAEKLIKQ 
      1060       1070       1080       1090       1100
INLSEEEIIE GRPILTKLKK ILAPGLKNST SSSSSSSSSS RSSLSSRSSH 
      1110       1120       1130       1140       1150
SSSSSSSSSS SASSLASLFG ASSSSSRSSS SRSSSSHSSS SHSSSSRSRA 
      1160       1170       1180       1190       1200
QPSKRVIYRH KFQKNHKKEV LSFQVTSAVL SRSSASSFEA IQRQNKFLGN 
      1210       1220       1230       1240       1250
KVAPTFAIIV RAIRADKNVL GYQMAVYLDR PTTRLQIILA ALAANNNWKL 
      1260       1270       1280       1290       1300
CADGALLSKH KVTAKIGWGA ECKQYNTIIT AETGLVGPRP AARIRVAWTE 
      1310       1320       1330       1340       1350
LPSTLKHYAQ RVYDYIPASM LAGLIQEKDQ NIADQLSLTV VATSDRTLDL 
      1360       1370       1380       1390       1400
IWKTPTRTVY KLALRLPITM PLAEIKGLTP FDGFADKVHY LFAKAGAAEC 
      1410       1420       1430       1440       1450
SFSKETLTTF NNRRYKYEMP LSCYQVLAQD CTDELKFMIL LKKDNIKQNH 
      1460       1470       1480       1490       1500
INVKIADIDI DLYLKNTDVI VKVNGMEIPI NNLPYQHPTA KIQIRPNGEG 
      1510       1520       1530       1540       1550
ISVFAPSLGL HEVYFDRNSW KVKVVDWMKG QTCGLCGKAD GEVRQEYRTP 
      1560       1570       1580       1590       1600
NGHLTKNAVS YAHSWVLQAE SCRDTTECRM KHESVQLEKQ VNILGQESRC 
      1610       1620       1630       1640       1650
YSVEPVLRCL PGCFPVNTTA VTVGFHCLPA DSDLKHPESL SSVYNNSVNL 
      1660 
RETVEAHLAC RCTAQCA
Length:1,667
Mass (Da):182,472
Last modified:June 12, 2007 - v1
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i832202B51F14ECCE
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...EMBLi

GenBank nucleotide sequence database

More...GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...DDBJi
Links Updated
DQ020120 mRNA Translation: AAZ17415.1

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
DQ020120 mRNA Translation: AAZ17415.1

3D structure databases

Database of comparative protein structure models

More...ModBasei		Search...

SWISS-MODEL Interactive Workspace

More...SWISS-MODEL-Workspacei		Submit a new modelling project...

Family and domain databases

Gene3Di1.25.10.20, 1 hit
2.20.50.20, 1 hit
2.20.90.10, 1 hit
2.30.230.10, 1 hit
InterProiView protein in InterPro
IPR015819 Lipid_transp_b-sht_shell
IPR001747 Lipid_transpt_N
IPR011030 Lipovitellin_superhlx_dom
IPR015816 Vitellinogen_b-sht_N
IPR015258 Vitellinogen_b-sht_shell
IPR037088 Vitellinogen_b-sht_shell_sf
IPR015255 Vitellinogen_open_b-sht
IPR015817 Vitellinogen_open_b-sht_sub1
IPR001846 VWF_type-D
PfamiView protein in Pfam
PF09172 DUF1943, 1 hit
PF09175 DUF1944, 1 hit
PF01347 Vitellogenin_N, 1 hit
PF00094 VWD, 1 hit
SMARTiView protein in SMART
SM01169 DUF1943, 1 hit
SM01170 DUF1944, 1 hit
SM00638 LPD_N, 1 hit
SM00216 VWD, 1 hit
SUPFAMiSSF48431 SSF48431, 1 hit
SSF56968 SSF56968, 3 hits
PROSITEiView protein in PROSITE
PS51211 VITELLOGENIN, 1 hit
PS51233 VWFD, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...ProtoNeti		Search...

MobiDB: a database of protein disorder and mobility annotations

More...MobiDBi		Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiA5GXQ1_MORAM
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: A5GXQ1
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: June 12, 2007
Last sequence update: June 12, 2007
Last modified: July 31, 2019
This is version 38 of the entry and version 1 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)
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