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Entry version 67 (31 Jul 2019)
Sequence version 2 (22 Nov 2017)
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Protein
Submitted name:

Uncharacterized protein

Gene

COL7A1

Organism
Sus scrofa (Pig)
Status
Unreviewed-Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

Enzyme and pathway databases

Reactome - a knowledgebase of biological pathways and processes

More...
Reactomei
R-SSC-1442490 Collagen degradation
R-SSC-1474244 Extracellular matrix organization
R-SSC-1650814 Collagen biosynthesis and modifying enzymes
R-SSC-2022090 Assembly of collagen fibrils and other multimeric structures
R-SSC-204005 COPII-mediated vesicle transport
R-SSC-2214320 Anchoring fibril formation
R-SSC-5694530 Cargo concentration in the ER
R-SSC-8948216 Collagen chain trimerization

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
Uncharacterized proteinImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:COL7A1Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiSus scrofa (Pig)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri9823 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCetartiodactylaSuinaSuidaeSus
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000008227 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 13

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte & Seán O’Donoghue; Source: COMPARTMENTS

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section denotes the presence of an N-terminal signal peptide.<p><a href='/help/signal' target='_top'>More...</a></p>Signal peptidei1 – 23Sequence analysisAdd BLAST23
<p>This subsection of the ‘PTM / Processing’ section describes the extent of a polypeptide chain in the mature protein following processing.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_501457134124 – 2938Sequence analysisAdd BLAST2915

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

Bgee dataBase for Gene Expression Evolution

More...
Bgeei
ENSSSCG00000011355 Expressed in 5 organ(s), highest expression level in prefrontal cortex

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRING: functional protein association networks

More...
STRINGi
9823.ENSSSCP00000012108

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini38 – 211VWFAInterPro annotationAdd BLAST174
Domaini234 – 329Fibronectin type-IIIInterPro annotationAdd BLAST96
Domaini330 – 416Fibronectin type-IIIInterPro annotationAdd BLAST87
Domaini417 – 507Fibronectin type-IIIInterPro annotationAdd BLAST91
Domaini510 – 597Fibronectin type-IIIInterPro annotationAdd BLAST88
Domaini600 – 687Fibronectin type-IIIInterPro annotationAdd BLAST88
Domaini688 – 775Fibronectin type-IIIInterPro annotationAdd BLAST88
Domaini778 – 866Fibronectin type-IIIInterPro annotationAdd BLAST89
Domaini869 – 957Fibronectin type-IIIInterPro annotationAdd BLAST89
Domaini958 – 1051Fibronectin type-IIIInterPro annotationAdd BLAST94
Domaini1054 – 1229VWFAInterPro annotationAdd BLAST176
Domaini2870 – 2923BPTI/Kunitz inhibitorInterPro annotationAdd BLAST54

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni1240 – 1935DisorderedSequence analysisAdd BLAST696
Regioni1964 – 2775DisorderedSequence analysisAdd BLAST812

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi1270 – 1290Pro-richSequence analysisAdd BLAST21
Compositional biasi1365 – 1389Pro-richSequence analysisAdd BLAST25
Compositional biasi1422 – 1436Pro-richSequence analysisAdd BLAST15
Compositional biasi1499 – 1519Pro-richSequence analysisAdd BLAST21
Compositional biasi1844 – 1871PolyampholyteSequence analysisAdd BLAST28
Compositional biasi2016 – 2032Pro-richSequence analysisAdd BLAST17
Compositional biasi2054 – 2069PolyampholyteSequence analysisAdd BLAST16
Compositional biasi2111 – 2139PolyampholyteSequence analysisAdd BLAST29
Compositional biasi2174 – 2188Pro-richSequence analysisAdd BLAST15
Compositional biasi2271 – 2285Pro-richSequence analysisAdd BLAST15
Compositional biasi2327 – 2346PolyampholyteSequence analysisAdd BLAST20
Compositional biasi2370 – 2394Pro-richSequence analysisAdd BLAST25
Compositional biasi2530 – 2561PolyampholyteSequence analysisAdd BLAST32
Compositional biasi2625 – 2639PolyampholyteSequence analysisAdd BLAST15

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
KOG3544 Eukaryota
ENOG410XNMM LUCA

Ensembl GeneTree

More...
GeneTreei
ENSGT00940000163668

InParanoid: Eukaryotic Ortholog Groups

More...
InParanoidi
F1SKM1

KEGG Orthology (KO)

More...
KOi
K16628

Identification of Orthologs from Complete Genome Data

More...
OMAi
YRVSWHS

Database of Orthologous Groups

More...
OrthoDBi
67372at2759

TreeFam database of animal gene trees

More...
TreeFami
TF351645

Family and domain databases

Conserved Domains Database

More...
CDDi
cd00063 FN3, 9 hits
cd00109 KU, 1 hit

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
2.60.40.10, 9 hits
3.40.50.410, 2 hits
4.10.410.10, 1 hit

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR008160 Collagen
IPR003961 FN3_dom
IPR036116 FN3_sf
IPR013783 Ig-like_fold
IPR002223 Kunitz_BPTI
IPR036880 Kunitz_BPTI_sf
IPR020901 Prtase_inh_Kunz-CS
IPR002035 VWF_A
IPR036465 vWFA_dom_sf

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF01391 Collagen, 19 hits
PF00041 fn3, 9 hits
PF00014 Kunitz_BPTI, 1 hit
PF00092 VWA, 2 hits

Protein Motif fingerprint database; a protein domain database

More...
PRINTSi
PR00759 BASICPTASE

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM00060 FN3, 9 hits
SM00327 VWA, 1 hit

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF49265 SSF49265, 5 hits
SSF53300 SSF53300, 2 hits
SSF57362 SSF57362, 1 hit

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS00280 BPTI_KUNITZ_1, 1 hit
PS50279 BPTI_KUNITZ_2, 1 hit
PS50853 FN3, 9 hits
PS50234 VWFA, 2 hits

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

F1SKM1-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MRLRLLVAVL CAGILAGAPR VRAQHRERVT CTRLYSADIV FLLDGSSSIG
60 70 80 90 100
RSNFREVRGF LEGLVLPFSR AASAQGVRFA AVQYSDDPRT EFSLDTLGSG
110 120 130 140 150
GDVIRAIREL SYKGGNTRTG AAILHVADQV FLPQLARPGV PKVCILITDG
160 170 180 190 200
KSQDLVDAAA QRLKEQGVKL FAVGIKNADP EELKRIASQP TSDFFFFVND
210 220 230 240 250
FSILRTLLPL VSRRVCTTAG GVPVTLPPDD STSGPRDLVL SEPGSQSLRV
260 270 280 290 300
QWTAASGPVT GYKVQYTPLT GLGQPLSSER REVSVPAGET SVRLQGLRPL
310 320 330 340 350
TEYQVTVVAL YANSIGEAVS GTARTTALEG PELTIQNSTA HSFLVAWQSV
360 370 380 390 400
PGATGYRVTW RVLSGGAMQQ QELGPGQGSV LLHDLEPGTD YEVTVSALFG
410 420 430 440 450
RNLGPATSLT ARTDISVEQT LRPLILGPTS ILLSWNLVPE ARGYRLEWRR
460 470 480 490 500
ESGLEVPQKV VLPSDVTHYQ LDGLQPGTEY RLTLYTLLEG REVATPATVV
510 520 530 540 550
PTGPELPVGP VMDLQATELP GQRVRVSWSP VPSATEYRIT MRSTQGVERT
560 570 580 590 600
LVLPGSQTAF DLDDVRAGLS YTVRVSARVG AREGSASVLT VRREPEAPLA
610 620 630 640 650
VPGLRVVASD TTRVRVAWGP VPGASGFRIS WRTDNGLESV QTLPPEATAT
660 670 680 690 700
DITGLRPGTS YQVAVSALRG REEGLPAVIV ARTDPVDPVR TVRVTQATSS
710 720 730 740 750
SVTITWNRVP GATGYRVSWH SGHGPEKSQL VSGETTVAEL DGLEPDTEYT
760 770 780 790 800
VRVWAHVAGA DGPPASVVVR TDPQPVGSVS KLQILNASSD VLRVTWVGVT
810 820 830 840 850
GATAYRLAWG RSEGGPTRQQ MLPGNTDSAE IRGLEGGVSY SVRVTALVGD
860 870 880 890 900
REGAPVSIVV TTPPEAPPAL ETLRVVQRGE HSLRLRWQPV PGVRGFRLRW
910 920 930 940 950
RPEGGQEQSR VLGPELSSYE LDGLEPATQY RIWLSVLGPA GEGPPSEVTA
960 970 980 990 1000
YTESSRFPST ELRVVDTSLD SVTLAWTPVS GVSSYILSWR PLRGPGQELP
1010 1020 1030 1040 1050
GASQTLSGTS NSQRVTALEP GVSYIFSLTP VREGVQGPVA SVTQNPVCPR
1060 1070 1080 1090 1100
GLMDVVFLLH TTRDNAHRSE AVKRALERLV SSVGPLGPQG VQVGLLSYSH
1110 1120 1130 1140 1150
RPSPLLSLNS SYDPGIILQN IRNIPYMDPS GNNLGVAVVT AHRYLLALDA
1160 1170 1180 1190 1200
PGRRRQVPGV MVLLVDEPLR GDFFSPIREA QAAGLKVMIL GLAGADPEQL
1210 1220 1230 1240 1250
RRLVPGMDPV QNFFAIDDGP SLDRAVSGLA TALCQTALTS QPQPEPCLVH
1260 1270 1280 1290 1300
CPKGQKGEPG EMGLRGQAGP PGPPGLPGRI GAPGPPGPPG SAIAKGERGF
1310 1320 1330 1340 1350
PGADGSPGSP GRPGTPGTSG PKGSPGWPGP RGEPGERGPR GPKGEPGEPG
1360 1370 1380 1390 1400
RVIGGEGPGL PGQKGDPGLP GPPGSRGPSG DPGPRGPPGF PGTAVKGEKG
1410 1420 1430 1440 1450
DRGERGPPGP GDGTAAPGDP GLPGLPGSPG PQGPVGPPGE KGEKGDSEDG
1460 1470 1480 1490 1500
APGLPGQPGV PGERGLRGFP GDTGPKGDRG LTGAVGEPGE KGERGSPGPV
1510 1520 1530 1540 1550
GPQGPPGVPG RPGAEGPEGP PGPTGRRGEK GEPGRPGDPA VGPGGAGAKG
1560 1570 1580 1590 1600
EKGDMGPTGP KGATGTKGER GPPGLALPGD PGPKGDPGER GPIGLTGRAG
1610 1620 1630 1640 1650
PPGDSGPPGE KGDPGRPGTP GLVGPRGRDG EVGEKGDEGP PGDPGLPGKA
1660 1670 1680 1690 1700
GERGLRGAPG ARGPVGEKGD QGDPGEDGRN GSPGPSGSKG DRGEPGPPGP
1710 1720 1730 1740 1750
PGRLVDTGLG AGEKGEPGDR GQEGPRGPKG DPGPPGASGE RGISGLRGPP
1760 1770 1780 1790 1800
GPQGDPGVRG PAGEKGDRGP PGLDGRSGLD GKPGAAGPPG LQGTAGKAGD
1810 1820 1830 1840 1850
PGRDGLPGLR GEQGPPGPPG PPGALGKPGE DGRPGLNGKN GEPGDPGEDG
1860 1870 1880 1890 1900
RKGEKGDSGA PGREGHDGPK GERGAPGSPG LQGPPGLPGQ VGPPGQGFPG
1910 1920 1930 1940 1950
MPGSSGPKGD RGEIGPKGEQ GLPGERGLRG EPGSVQNVER LLENIGLKTS
1960 1970 1980 1990 2000
ALREIVETWD ESSGSFLPVP ERLRGPKGNP GERGPPGKEG PIGFSGDRGP
2010 2020 2030 2040 2050
KGDRGDPGPQ GPPGLALGER GPPGPPGLAG EPGKPGIPGL PGRAGSVGEA
2060 2070 2080 2090 2100
GRPGERGVRG EKGERGEQGR DGSPGLPGPP GPPGPKVAVD EIGSGLSRDQ
2110 2120 2130 2140 2150
GPPGLKGAKG EPGSDGDRGP KGDRGMPGIK GDRGEPGQRG HDGSPGLPGE
2160 2170 2180 2190 2200
RGVAGLEGKP GPQGPRGVPG PVGGHGDPGP PGAPGLAGPS GPQGPSGLKG
2210 2220 2230 2240 2250
EPGDTGPPGR GLPGPTGAVG LPGPPGPSGL VGPQGAPGLP GQVGETGKPG
2260 2270 2280 2290 2300
APGRDGASGK DGERGVPGVP GSPGLPGPVG PKGEPGPMGT PGQAVIGPPG
2310 2320 2330 2340 2350
AKGEKGTPGG LAGDLVGEPG AKGDRGLPGP RGEKGEAGRA GEPGDPGEDG
2360 2370 2380 2390 2400
QKGAPGLKGN KGDPGVGAQG PPGPLGPPGL KGDLGPPGPP GAPGIVGFPG
2410 2420 2430 2440 2450
QTGLRGEMGQ PGPSGERGLA GLPGREGAPG PLGPPGPAGS VGAPGAPGLK
2460 2470 2480 2490 2500
GDKGDPGAGP PGARGERGEP GVRGEDGRPG PEGPRGLMGP PGGRGERGEK
2510 2520 2530 2540 2550
GDAGSSGLKG DKGDSAVTVG PPGPRGAKGD MGERGPRGLD GDKGPRGDSG
2560 2570 2580 2590 2600
DPGEKGTKGE PGDRGSAGLL GPRGLTGPKG EPGAAGIPGD PGSPGKDGVP
2610 2620 2630 2640 2650
GVRGDKGDVG FMGPRGLKGE RGVKGACGLD GEKGDKGEAG PPGRPGLAGR
2660 2670 2680 2690 2700
KGELGEPGIP GPSGAPGKEG LIGPKGDRGF DGQPGPKGDQ GEKGERGPPG
2710 2720 2730 2740 2750
TGGFPGPRGS DGSSGPPGPP GSVGPKGPEG LQGQKGERGP PGESVVGAPG
2760 2770 2780 2790 2800
APGTPGERGE QGRPGPAGPR GEKGEAALTE DDIRGLVRQE MSQHCACQGQ
2810 2820 2830 2840 2850
FIASGSRPLP SYAADTAGPQ LHRVPVLRVS HAEEEGQVPP EDDEYEYSEY
2860 2870 2880 2890 2900
SVEEYQNPEA PWDGDAPDPC SLPLDEGSCT AYTLRWYHRA VAGGTVACHP
2910 2920 2930
FVYGGCGGNA NRFETREACE SRCPPRMAQS QGTGAARS
Length:2,938
Mass (Da):295,076
Last modified:November 22, 2017 - v2
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i20FEDABCDEA7BADD
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AEMK02000086 Genomic DNA No translation available.

NCBI Reference Sequences

More...
RefSeqi
XP_005669576.1, XM_005669519.2
XP_013837111.1, XM_013981657.1

Genome annotation databases

Ensembl eukaryotic genome annotation project

More...
Ensembli
ENSSSCT00000012432; ENSSSCP00000012108; ENSSSCG00000011355
ENSSSCT00000049668; ENSSSCP00000036044; ENSSSCG00000011355

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
100523209

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
ssc:100523209

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AEMK02000086 Genomic DNA No translation available.
RefSeqiXP_005669576.1, XM_005669519.2
XP_013837111.1, XM_013981657.1

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Protein-protein interaction databases

STRINGi9823.ENSSSCP00000012108

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSSSCT00000012432; ENSSSCP00000012108; ENSSSCG00000011355
ENSSSCT00000049668; ENSSSCP00000036044; ENSSSCG00000011355
GeneIDi100523209
KEGGissc:100523209

Organism-specific databases

Comparative Toxicogenomics Database

More...
CTDi
1294

Phylogenomic databases

eggNOGiKOG3544 Eukaryota
ENOG410XNMM LUCA
GeneTreeiENSGT00940000163668
InParanoidiF1SKM1
KOiK16628
OMAiYRVSWHS
OrthoDBi67372at2759
TreeFamiTF351645

Enzyme and pathway databases

ReactomeiR-SSC-1442490 Collagen degradation
R-SSC-1474244 Extracellular matrix organization
R-SSC-1650814 Collagen biosynthesis and modifying enzymes
R-SSC-2022090 Assembly of collagen fibrils and other multimeric structures
R-SSC-204005 COPII-mediated vesicle transport
R-SSC-2214320 Anchoring fibril formation
R-SSC-5694530 Cargo concentration in the ER
R-SSC-8948216 Collagen chain trimerization

Gene expression databases

BgeeiENSSSCG00000011355 Expressed in 5 organ(s), highest expression level in prefrontal cortex

Family and domain databases

CDDicd00063 FN3, 9 hits
cd00109 KU, 1 hit
Gene3Di2.60.40.10, 9 hits
3.40.50.410, 2 hits
4.10.410.10, 1 hit
InterProiView protein in InterPro
IPR008160 Collagen
IPR003961 FN3_dom
IPR036116 FN3_sf
IPR013783 Ig-like_fold
IPR002223 Kunitz_BPTI
IPR036880 Kunitz_BPTI_sf
IPR020901 Prtase_inh_Kunz-CS
IPR002035 VWF_A
IPR036465 vWFA_dom_sf
PfamiView protein in Pfam
PF01391 Collagen, 19 hits
PF00041 fn3, 9 hits
PF00014 Kunitz_BPTI, 1 hit
PF00092 VWA, 2 hits
PRINTSiPR00759 BASICPTASE
SMARTiView protein in SMART
SM00060 FN3, 9 hits
SM00327 VWA, 1 hit
SUPFAMiSSF49265 SSF49265, 5 hits
SSF53300 SSF53300, 2 hits
SSF57362 SSF57362, 1 hit
PROSITEiView protein in PROSITE
PS00280 BPTI_KUNITZ_1, 1 hit
PS50279 BPTI_KUNITZ_2, 1 hit
PS50853 FN3, 9 hits
PS50234 VWFA, 2 hits

ProtoNet; Automatic hierarchical classification of proteins

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ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
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<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiF1SKM1_PIG
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: F1SKM1
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: May 3, 2011
Last sequence update: November 22, 2017
Last modified: July 31, 2019
This is version 67 of the entry and version 2 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
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