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Entry version 50 (31 Jul 2019)
Sequence version 2 (28 Feb 2018)
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Protein
Submitted name:

Latent transforming growth factor beta binding protein 4

Gene

LTBP4

Organism
Gorilla gorilla gorilla (Western lowland gorilla)
Status
Unreviewed-Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

Caution

Lacks conserved residue(s) required for the propagation of feature annotation.PROSITE-ProRule annotation

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
Latent transforming growth factor beta binding protein 4Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:LTBP4Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiGorilla gorilla gorilla (Western lowland gorilla)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri9595 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeGorilla
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000001519 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 19

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘PTM / Processing’ section denotes the presence of an N-terminal signal peptide.<p><a href='/help/signal' target='_top'>More...</a></p>Signal peptidei1 – 26Sequence analysisAdd BLAST26
<p>This subsection of the ‘PTM / Processing’ section describes the extent of a polypeptide chain in the mature protein following processing.<p><a href='/help/chain' target='_top'>More...</a></p>ChainiPRO_501412864327 – 1557Sequence analysisAdd BLAST1531

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the PTM / Processing":/help/ptm_processing_section section describes the positions of cysteine residues participating in disulfide bonds.<p><a href='/help/disulfid' target='_top'>More...</a></p>Disulfide bondi86 ↔ 96PROSITE-ProRule annotation
Disulfide bondi104 ↔ 113PROSITE-ProRule annotation
Disulfide bondi631 ↔ 640PROSITE-ProRule annotation

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - PTMi

Disulfide bondPROSITE-ProRule annotationSAAS annotation

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

Bgee dataBase for Gene Expression Evolution

More...
Bgeei
ENSGGOG00000010783 Expressed in 6 organ(s), highest expression level in heart

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini82 – 114EGF-likeInterPro annotationAdd BLAST33
Domaini220 – 260TBInterPro annotationAdd BLAST41
Domaini290 – 326EGF-likeInterPro annotationAdd BLAST37
Domaini340 – 392TBInterPro annotationAdd BLAST53
Domaini520 – 561EGF-likeInterPro annotationAdd BLAST42
Domaini562 – 603EGF-likeInterPro annotationAdd BLAST42
Domaini604 – 641EGF-likeInterPro annotationAdd BLAST38
Domaini643 – 680EGF-likeInterPro annotationAdd BLAST38
Domaini685 – 726EGF-likeInterPro annotationAdd BLAST42
Domaini767 – 805EGF-likeInterPro annotationAdd BLAST39
Domaini811 – 852EGF-likeInterPro annotationAdd BLAST42
Domaini853 – 893EGF-likeInterPro annotationAdd BLAST41
Domaini982 – 1023EGF-likeInterPro annotationAdd BLAST42
Domaini1114 – 1168TBInterPro annotationAdd BLAST55
Domaini1186 – 1228EGF-likeInterPro annotationAdd BLAST43
Domaini1229 – 1270EGF-likeInterPro annotationAdd BLAST42
Domaini1282 – 1335TBInterPro annotationAdd BLAST54
Domaini1466 – 1502EGF-likeInterPro annotationAdd BLAST37
Domaini1507 – 1551EGF-likeInterPro annotationAdd BLAST45

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni407 – 479DisorderedSequence analysisAdd BLAST73
Regioni1063 – 1112DisorderedSequence analysisAdd BLAST50
Regioni1379 – 1457DisorderedSequence analysisAdd BLAST79

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi415 – 430PolarSequence analysisAdd BLAST16
Compositional biasi1082 – 1103Pro-richSequence analysisAdd BLAST22
Compositional biasi1379 – 1395Pro-richSequence analysisAdd BLAST17

Keywords - Domaini

EGF-like domainPROSITE-ProRule annotationSAAS annotation, RepeatSAAS annotation, SignalSequence analysis

Phylogenomic databases

Ensembl GeneTree

More...
GeneTreei
ENSGT00940000158234

KEGG Orthology (KO)

More...
KOi
K08023

Database of Orthologous Groups

More...
OrthoDBi
1174178at2759

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
3.90.290.10, 4 hits

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR001881 EGF-like_Ca-bd_dom
IPR013032 EGF-like_CS
IPR000742 EGF-like_dom
IPR000152 EGF-type_Asp/Asn_hydroxyl_site
IPR018097 EGF_Ca-bd_CS
IPR009030 Growth_fac_rcpt_cys_sf
IPR017878 TB_dom
IPR036773 TB_dom_sf

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF07645 EGF_CA, 17 hits
PF12661 hEGF, 1 hit
PF00683 TB, 3 hits

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM00181 EGF, 20 hits
SM00179 EGF_CA, 19 hits

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF57184 SSF57184, 6 hits
SSF57581 SSF57581, 4 hits

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS00010 ASX_HYDROXYL, 13 hits
PS00022 EGF_1, 2 hits
PS01186 EGF_2, 9 hits
PS50026 EGF_3, 15 hits
PS01187 EGF_CA, 8 hits
PS51364 TB, 4 hits

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequence (1+)i

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

This entry has 1 described isoform and 2 potential isoforms that are computationally mapped.Show allAlign All

G3RN42-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MAGGVRLLWV SLLVLLAQLG PQPGLGRLGE RLRVRFTPVV CGLRCVHGPT
60 70 80 90 100
GSRCTPTCAP RNATSVDSGA PGGAAPGGPG FRAFLCPLIC HNGGVCVKPD
110 120 130 140 150
RCLCPPDFAG KFCQLHSSGA RPPAPAIPGL TRSVYTMPLA NHRDDEHGVA
160 170 180 190 200
SMVSVHVEHP QEASVVVHQV ERVSGPWEEA DAEAVARAEA AARAEAAAPY
210 220 230 240 250
TVLAQSAPRE DGYSDASGFG YCFRELRGGE CASPLPGLRT QEVCCRGAGL
260 270 280 290 300
AWGVHDCQLC SERLGNSERV SAPDGPCPTG FERVNGSCED VDECATGGRC
310 320 330 340 350
QHGECANTRG GYTCVCPDGF LLDSSRSSCI SQHVISEAKG PCFRVLRDGG
360 370 380 390 400
CSLPILRNIT KQICCCSRVG KAWGRGCQLC PPFGSEGFRE ICPAGPGYHY
410 420 430 440 450
SASDLRYNTR PLGQEPPRVS LSQPRTLPAT SRPSAGFLPT HRLEPRPEPR
460 470 480 490 500
PDPRPGPELP LPSIPAWTGP EIPESGPSSG MCQRNPQVCG PGRCISRPSG
510 520 530 540 550
YTCACDSGFR LSPQGTRCID VDECRRVPPP CAPGRCENSP GSFRCVCGPG
560 570 580 590 600
FRAGPRAAEC LDVDECHRVP PPCDLGRCEN TPGSFLCVCP AGYQAAPHGA
610 620 630 640 650
SCQDVDECTQ SPGLCGRGAC KNLPGSFRCV CPAGFRGSAC EEDVDECAQE
660 670 680 690 700
PPPCGPGRCD NTAGSFHCAC PAGFRSRGPG APCQDVDECA RSPPPCTYGR
710 720 730 740 750
CENTEGSFQC VCPMGFQPNA AGSECEDVDE CENHLACPGQ ECVNSPGSFQ
760 770 780 790 800
CRACPSGHHL HRGRCTDVDE CSSGAPPCGP HGHCTNTEGS FRCSCAPGYR
810 820 830 840 850
APSGRPGPCA DVNECLEGDF CFPHGECLNT DGSFACTCAP GYRPGPRGAS
860 870 880 890 900
CLDVDECSEE DLCQSGICTN TDGSFECICP PGHRAGPDLA SCLDVDECRE
910 920 930 940 950
RGPALCGSQR CENSPGSYRC VRDCDPGYHA GPEGTCDDVD ECQEYGPEIC
960 970 980 990 1000
GAQRCENTPG SYRCTPACDP GYQPTPGGGC QDVDECRNRS FCGAHAVCQN
1010 1020 1030 1040 1050
LPGSFQCLCD QGYEGARDGR HCVDVNECET LQGVCGAALC ENVEGSFLCV
1060 1070 1080 1090 1100
CPNSPEEFDP MTGRCVPPRT SAGTFPGSQP QAPASPVLPA RPPPPPLPRR
1110 1120 1130 1140 1150
PSTPRQGPVG SGRRECYFDT AAPDACDNIL ARNVTWQECC CTVGEGWGSG
1160 1170 1180 1190 1200
CRIQQCPGTE TAEYQSLCPH GRGYLAPSGD LSLRRDVDEC QLFRDQVCKS
1210 1220 1230 1240 1250
GVCVNTAPGY SCYCSNGYYY HTQRLECIDN DECADEEPAC EGGRCVNTVG
1260 1270 1280 1290 1300
SYHCTCEPPL VLDGSQRRCV SNESQSLDDN LGVCWQEVGA DLVCSHPRLD
1310 1320 1330 1340 1350
RQATYTECCC LYGEAWGMDC ALCPAQDSDD FEALCNVLRP PAYSPPRPGG
1360 1370 1380 1390 1400
FGLPYEYGPD LGPPYQGLPY GPELYPPPAL PYDPYPPPPG PFARREAPYG
1410 1420 1430 1440 1450
APRFDMPDFE DDGGPYGESE APAPPGPGTR WPYRSRDTRR SFPEPEEPPE
1460 1470 1480 1490 1500
GGSYAGSLAE PYEELEAEEC GILDGCTNGR CVRVPEGFTC RCFDGYRLDM
1510 1520 1530 1540 1550
TRMACVDINE CDEAEAASPL CVNARCLNTD GSFRCICRPG FAPTHQPHHC

APARPRA
Length:1,557
Mass (Da):165,696
Last modified:February 28, 2018 - v2
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:iE1A93390467C4F6C
GO

<p>In eukaryotic reference proteomes, unreviewed entries that are likely to belong to the same gene are computationally mapped, based on gene identifiers from Ensembl, EnsemblGenomes and model organism databases.<p><a href='/help/gene_centric_isoform_mapping' target='_top'>More...</a></p>Computationally mapped potential isoform sequencesi

There are 2 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
G3S458G3S458_GORGO
Latent transforming growth factor b...
LTBP4
1,624Annotation score:

Annotation score:2 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
G3R5F6G3R5F6_GORGO
Latent transforming growth factor b...
LTBP4
1,587Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

More...
GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
CABD030113578 Genomic DNA No translation available.
CABD030113579 Genomic DNA No translation available.
CABD030113580 Genomic DNA No translation available.

NCBI Reference Sequences

More...
RefSeqi
XP_004060805.1, XM_004060757.2

Genome annotation databases

Ensembl eukaryotic genome annotation project

More...
Ensembli
ENSGGOT00000023610; ENSGGOP00000017208; ENSGGOG00000010783

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
101143736

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
ggo:101143736

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CABD030113578 Genomic DNA No translation available.
CABD030113579 Genomic DNA No translation available.
CABD030113580 Genomic DNA No translation available.
RefSeqiXP_004060805.1, XM_004060757.2

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Genome annotation databases

EnsembliENSGGOT00000023610; ENSGGOP00000017208; ENSGGOG00000010783
GeneIDi101143736
KEGGiggo:101143736

Organism-specific databases

Comparative Toxicogenomics Database

More...
CTDi
8425

Phylogenomic databases

GeneTreeiENSGT00940000158234
KOiK08023
OrthoDBi1174178at2759

Gene expression databases

BgeeiENSGGOG00000010783 Expressed in 6 organ(s), highest expression level in heart

Family and domain databases

Gene3Di3.90.290.10, 4 hits
InterProiView protein in InterPro
IPR001881 EGF-like_Ca-bd_dom
IPR013032 EGF-like_CS
IPR000742 EGF-like_dom
IPR000152 EGF-type_Asp/Asn_hydroxyl_site
IPR018097 EGF_Ca-bd_CS
IPR009030 Growth_fac_rcpt_cys_sf
IPR017878 TB_dom
IPR036773 TB_dom_sf
PfamiView protein in Pfam
PF07645 EGF_CA, 17 hits
PF12661 hEGF, 1 hit
PF00683 TB, 3 hits
SMARTiView protein in SMART
SM00181 EGF, 20 hits
SM00179 EGF_CA, 19 hits
SUPFAMiSSF57184 SSF57184, 6 hits
SSF57581 SSF57581, 4 hits
PROSITEiView protein in PROSITE
PS00010 ASX_HYDROXYL, 13 hits
PS00022 EGF_1, 2 hits
PS01186 EGF_2, 9 hits
PS50026 EGF_3, 15 hits
PS01187 EGF_CA, 8 hits
PS51364 TB, 4 hits

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiG3RN42_GORGO
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: G3RN42
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: November 16, 2011
Last sequence update: February 28, 2018
Last modified: July 31, 2019
This is version 50 of the entry and version 2 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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