UniProtKB - Q767L7 (TBB5_PIG)
Tubulin beta chain
TUBB
Functioni
Regions
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Nucleotide bindingi | 140 – 146 | GTPSequence analysis | 7 |
GO - Molecular functioni
- GTPase activity Source: InterPro
- GTP binding Source: GO_Central
- structural constituent of cytoskeleton Source: GO_Central
GO - Biological processi
- microtubule-based process Source: GO_Central
- microtubule cytoskeleton organization Source: GO_Central
- mitotic cell cycle Source: GO_Central
Keywordsi
Ligand | GTP-binding, Nucleotide-binding |
Enzyme and pathway databases
Reactomei | R-SSC-2565942 Regulation of PLK1 Activity at G2/M Transition R-SSC-380259 Loss of Nlp from mitotic centrosomes R-SSC-380270 Recruitment of mitotic centrosome proteins and complexes R-SSC-380284 Loss of proteins required for interphase microtubule organization from the centrosome R-SSC-380320 Recruitment of NuMA to mitotic centrosomes R-SSC-5620912 Anchoring of the basal body to the plasma membrane R-SSC-6798695 Neutrophil degranulation R-SSC-8854518 AURKA Activation by TPX2 |
Names & Taxonomyi
Protein namesi | Recommended name: Tubulin beta chainAlternative name(s): Tubulin beta-5 chain |
Gene namesi | Name:TUBB Synonyms:TUBB5 |
Organismi | Sus scrofa (Pig) |
Taxonomic identifieri | 9823 [NCBI] |
Taxonomic lineagei | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Laurasiatheria › Cetartiodactyla › Suina › Suidae › Sus |
Proteomesi |
|
Subcellular locationi
Cytoskeleton
- cytoskeleton By similarity
Cytoskeleton
- microtubule Source: GO_Central
Other locations
- cytoplasm Source: GO_Central
Keywords - Cellular componenti
Cytoplasm, Cytoskeleton, MicrotubulePTM / Processingi
Molecule processing
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
ChainiPRO_0000297530 | 1 – 444 | Tubulin beta chainAdd BLAST | 444 |
Amino acid modifications
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Modified residuei | 40 | PhosphoserineBy similarity | 1 | |
Modified residuei | 55 | PhosphothreonineBy similarity | 1 | |
Modified residuei | 58 | N6-acetyllysine; alternateBy similarity | 1 | |
Modified residuei | 58 | N6-succinyllysine; alternateBy similarity | 1 | |
Cross-linki | 58 | Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin); alternateBy similarity | ||
Modified residuei | 172 | Phosphoserine; by CDK1By similarity | 1 | |
Modified residuei | 285 | PhosphothreonineBy similarity | 1 | |
Modified residuei | 290 | PhosphothreonineBy similarity | 1 | |
Modified residuei | 318 | Omega-N-methylarginineBy similarity | 1 | |
Cross-linki | 324 | Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin)By similarity | ||
Modified residuei | 438 | 5-glutamyl polyglutamateBy similarity | 1 |
Post-translational modificationi
Keywords - PTMi
Acetylation, Isopeptide bond, Methylation, Phosphoprotein, Ubl conjugationProteomic databases
PaxDbi | Q767L7 |
PeptideAtlasi | Q767L7 |
PRIDEi | Q767L7 |
Expressioni
Gene expression databases
Bgeei | ENSSSCG00000001379 Expressed in 6 organ(s), highest expression level in lung |
ExpressionAtlasi | Q767L7 baseline and differential |
Genevisiblei | Q767L7 SS |
Interactioni
Subunit structurei
Heterodimer of alpha and beta chains. Heterodimer. A typical microtubule is a hollow water-filled tube with an outer diameter of 25 nm and an inner diameter of 15 nM. Alpha-beta heterodimers associate head-to-tail to form protofilaments running lengthwise along the microtubule wall with the beta-tubulin subunit facing the microtubule plus end conferring a structural polarity. Microtubules usually have 13 protofilaments but different protofilament numbers can be found in some organisms and specialized cells.
Interacts with PIFO.
Interacts with DIAPH1.
Interacts with MX1. May interact with RNABP10.
Interacts with CFAP157.
By similarityProtein-protein interaction databases
BioGridi | 1151299, 4 interactors |
STRINGi | 9823.ENSSSCP00000001459 |
Family & Domainsi
Sequence similaritiesi
Phylogenomic databases
eggNOGi | KOG1375 Eukaryota COG5023 LUCA |
GeneTreei | ENSGT00940000154370 |
HOGENOMi | HOG000165710 |
InParanoidi | Q767L7 |
KOi | K07375 |
OMAi | ILLVCMF |
OrthoDBi | 962471at2759 |
TreeFami | TF300298 |
Family and domain databases
Gene3Di | 1.10.287.600, 1 hit 3.30.1330.20, 1 hit 3.40.50.1440, 1 hit |
InterProi | View protein in InterPro IPR013838 Beta-tubulin_BS IPR002453 Beta_tubulin IPR008280 Tub_FtsZ_C IPR000217 Tubulin IPR018316 Tubulin/FtsZ_2-layer-sand-dom IPR037103 Tubulin/FtsZ_C_sf IPR036525 Tubulin/FtsZ_GTPase_sf IPR023123 Tubulin_C IPR017975 Tubulin_CS IPR003008 Tubulin_FtsZ_GTPase |
PANTHERi | PTHR11588 PTHR11588, 1 hit |
Pfami | View protein in Pfam PF00091 Tubulin, 1 hit PF03953 Tubulin_C, 1 hit |
PRINTSi | PR01163 BETATUBULIN PR01161 TUBULIN |
SMARTi | View protein in SMART SM00864 Tubulin, 1 hit SM00865 Tubulin_C, 1 hit |
SUPFAMi | SSF52490 SSF52490, 1 hit SSF55307 SSF55307, 1 hit |
PROSITEi | View protein in PROSITE PS00227 TUBULIN, 1 hit PS00228 TUBULIN_B_AUTOREG, 1 hit |
(1+)i Sequence
Sequence statusi: Complete.
This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All
10 20 30 40 50
MREIVHIQAG QCGNQIGAKF WEVISDEHGI DPTGTYHGDS DLQLDRISVY
60 70 80 90 100
YNEATGGKYV PRAILVDLEP GTMDSVRSGP FGQIFRPDNF VFGQSGAGNN
110 120 130 140 150
WAKGHYTEGA ELVDSVLDVV RKEAESCDCL QGFQLTHSLG GGTGSGMGTL
160 170 180 190 200
LISKIREEYP DRIMNTFSVV PSPKVSDTVV EPYNATLSVH QLVENTDETY
210 220 230 240 250
CIDNEALYDI CFRTLKLTTP TYGDLNHLVS ATMSGVTTCL RFPGQLNADL
260 270 280 290 300
RKLAVNMVPF PRLHFFMPGF APLTSRGSQQ YRALTVPELT QQVFDAKNMM
310 320 330 340 350
AACDPRHGRY LTVAAVFRGR MSMKEVDEQM LNVQNKNSSY FVEWIPNNVK
360 370 380 390 400
TAVCDIPPRG LKMAVTFIGN STAIQELFKR ISEQFTAMFR RKAFLHWYTG
410 420 430 440
EGMDEMEFTE AESNMNDLVS EYQQYQDATA EEEEDFGEEA EEEA
Computationally mapped potential isoform sequencesi
There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basketF2Z5B2 | F2Z5B2_PIG | Tubulin beta chain | TUBB | 459 | Annotation score: |
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | DQ225361 mRNA Translation: ABB58916.1 AB113356 Genomic DNA Translation: BAD08435.1 |
RefSeqi | NP_001038077.1, NM_001044612.1 |
Genome annotation databases
Ensembli | ENSSSCT00000001501; ENSSSCP00000001459; ENSSSCG00000001379 ENSSSCT00070049133; ENSSSCP00070041492; ENSSSCG00070024618 |
GeneIDi | 733686 |
KEGGi | ssc:733686 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | DQ225361 mRNA Translation: ABB58916.1 AB113356 Genomic DNA Translation: BAD08435.1 |
RefSeqi | NP_001038077.1, NM_001044612.1 |
3D structure databases
SMRi | Q767L7 |
ModBasei | Search... |
Protein-protein interaction databases
BioGridi | 1151299, 4 interactors |
STRINGi | 9823.ENSSSCP00000001459 |
Proteomic databases
PaxDbi | Q767L7 |
PeptideAtlasi | Q767L7 |
PRIDEi | Q767L7 |
Genome annotation databases
Ensembli | ENSSSCT00000001501; ENSSSCP00000001459; ENSSSCG00000001379 ENSSSCT00070049133; ENSSSCP00070041492; ENSSSCG00070024618 |
GeneIDi | 733686 |
KEGGi | ssc:733686 |
Organism-specific databases
CTDi | 203068 |
Phylogenomic databases
eggNOGi | KOG1375 Eukaryota COG5023 LUCA |
GeneTreei | ENSGT00940000154370 |
HOGENOMi | HOG000165710 |
InParanoidi | Q767L7 |
KOi | K07375 |
OMAi | ILLVCMF |
OrthoDBi | 962471at2759 |
TreeFami | TF300298 |
Enzyme and pathway databases
Reactomei | R-SSC-2565942 Regulation of PLK1 Activity at G2/M Transition R-SSC-380259 Loss of Nlp from mitotic centrosomes R-SSC-380270 Recruitment of mitotic centrosome proteins and complexes R-SSC-380284 Loss of proteins required for interphase microtubule organization from the centrosome R-SSC-380320 Recruitment of NuMA to mitotic centrosomes R-SSC-5620912 Anchoring of the basal body to the plasma membrane R-SSC-6798695 Neutrophil degranulation R-SSC-8854518 AURKA Activation by TPX2 |
Gene expression databases
Bgeei | ENSSSCG00000001379 Expressed in 6 organ(s), highest expression level in lung |
ExpressionAtlasi | Q767L7 baseline and differential |
Genevisiblei | Q767L7 SS |
Family and domain databases
Gene3Di | 1.10.287.600, 1 hit 3.30.1330.20, 1 hit 3.40.50.1440, 1 hit |
InterProi | View protein in InterPro IPR013838 Beta-tubulin_BS IPR002453 Beta_tubulin IPR008280 Tub_FtsZ_C IPR000217 Tubulin IPR018316 Tubulin/FtsZ_2-layer-sand-dom IPR037103 Tubulin/FtsZ_C_sf IPR036525 Tubulin/FtsZ_GTPase_sf IPR023123 Tubulin_C IPR017975 Tubulin_CS IPR003008 Tubulin_FtsZ_GTPase |
PANTHERi | PTHR11588 PTHR11588, 1 hit |
Pfami | View protein in Pfam PF00091 Tubulin, 1 hit PF03953 Tubulin_C, 1 hit |
PRINTSi | PR01163 BETATUBULIN PR01161 TUBULIN |
SMARTi | View protein in SMART SM00864 Tubulin, 1 hit SM00865 Tubulin_C, 1 hit |
SUPFAMi | SSF52490 SSF52490, 1 hit SSF55307 SSF55307, 1 hit |
PROSITEi | View protein in PROSITE PS00227 TUBULIN, 1 hit PS00228 TUBULIN_B_AUTOREG, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | TBB5_PIG | |
Accessioni | Q767L7Primary (citable) accession number: Q767L7 | |
Entry historyi | Integrated into UniProtKB/Swiss-Prot: | August 21, 2007 |
Last sequence update: | July 5, 2004 | |
Last modified: | October 16, 2019 | |
This is version 127 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Reviewed (UniProtKB/Swiss-Prot) | |
Annotation program | Chordata Protein Annotation Program |
Miscellaneousi
Keywords - Technical termi
Complete proteome, Reference proteomeDocuments
- SIMILARITY comments
Index of protein domains and families