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Entry version 161 (16 Oct 2019)
Sequence version 3 (01 Oct 2002)
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Protein
Submitted name:

UpSET, isoform A

Gene

upSET

Organism
Drosophila melanogaster (Fruit fly)
Status
Unreviewed-Annotation score:

Annotation score:4 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Experimental evidence at protein leveli <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

LigandMetal-binding, Zinc

Enzyme and pathway databases

Reactome - a knowledgebase of biological pathways and processes

More...
Reactomei
R-DME-8936459 RUNX1 regulates genes involved in megakaryocyte differentiation and platelet function

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
UpSET, isoform AImported
Submitted name:
UpSET, isoform BImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namesi
Name:upSETImported
Synonyms:Dmel\CG9007Imported, UpSETImported
ORF Names:CG9007Imported, Dmel_CG9007Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiDrosophila melanogaster (Fruit fly)Imported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri7227 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaEcdysozoaArthropodaHexapodaInsectaPterygotaNeopteraHolometabolaDipteraBrachyceraMuscomorphaEphydroideaDrosophilidaeDrosophilaSophophora
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000000803 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Chromosome 3L

Organism-specific databases

Drosophila genome database

More...
FlyBasei
FBgn0036398 upSET

<p>This section provides information on the location and the topology of the mature protein in the cell.<p><a href='/help/subcellular_location_section' target='_top'>More...</a></p>Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte & Seán O’Donoghue; Source: COMPARTMENTS

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Proteomic databases

PRoteomics IDEntifications database

More...
PRIDEi
Q9VUB5

<p>This section provides information on the expression of a gene at the mRNA or protein level in cells or in tissues of multicellular organisms.<p><a href='/help/expression_section' target='_top'>More...</a></p>Expressioni

Gene expression databases

Bgee dataBase for Gene Expression Evolution

More...
Bgeei
FBgn0036398 Expressed in 30 organ(s), highest expression level in embryo

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

GO - Molecular functioni

Protein-protein interaction databases

Protein interaction database and analysis system

More...
IntActi
Q9VUB5, 5 interactors

STRING: functional protein association networks

More...
STRINGi
7227.FBpp0075510

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini854 – 902PHD-typeInterPro annotationAdd BLAST49

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes a region of interest that cannot be described in other subsections.<p><a href='/help/region' target='_top'>More...</a></p>Regioni1 – 46DisorderedSequence analysisAdd BLAST46
Regioni409 – 435DisorderedSequence analysisAdd BLAST27
Regioni638 – 712DisorderedSequence analysisAdd BLAST75
Regioni747 – 776DisorderedSequence analysisAdd BLAST30
Regioni815 – 850DisorderedSequence analysisAdd BLAST36
Regioni962 – 1044DisorderedSequence analysisAdd BLAST83
Regioni1371 – 1395DisorderedSequence analysisAdd BLAST25
Regioni1446 – 1495DisorderedSequence analysisAdd BLAST50
Regioni1639 – 1697DisorderedSequence analysisAdd BLAST59
Regioni1739 – 1977DisorderedSequence analysisAdd BLAST239
Regioni2118 – 2149DisorderedSequence analysisAdd BLAST32
Regioni2200 – 2220DisorderedSequence analysisAdd BLAST21
Regioni2264 – 2339DisorderedSequence analysisAdd BLAST76
Regioni2402 – 2431DisorderedSequence analysisAdd BLAST30
Regioni2454 – 2561DisorderedSequence analysisAdd BLAST108
Regioni2592 – 2612DisorderedSequence analysisAdd BLAST21
Regioni2654 – 2679DisorderedSequence analysisAdd BLAST26
Regioni2715 – 2771DisorderedSequence analysisAdd BLAST57
Regioni2941 – 2992DisorderedSequence analysisAdd BLAST52
Regioni3008 – 3039DisorderedSequence analysisAdd BLAST32

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and domains’ section denotes the positions of regions of coiled coil within the protein.<p><a href='/help/coiled' target='_top'>More...</a></p>Coiled coili277 – 297Sequence analysisAdd BLAST21

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the ‘Family and Domains’ section describes the position of regions of compositional bias within the protein and the particular amino acids that are over-represented within those regions.<p><a href='/help/compbias' target='_top'>More...</a></p>Compositional biasi1 – 31PolarSequence analysisAdd BLAST31
Compositional biasi638 – 665PolarSequence analysisAdd BLAST28
Compositional biasi685 – 710PolarSequence analysisAdd BLAST26
Compositional biasi815 – 831PolarSequence analysisAdd BLAST17
Compositional biasi1739 – 1800PolarSequence analysisAdd BLAST62
Compositional biasi1801 – 1838PolyampholyteSequence analysisAdd BLAST38
Compositional biasi1839 – 1877PolarSequence analysisAdd BLAST39
Compositional biasi1890 – 1909PolarSequence analysisAdd BLAST20
Compositional biasi1952 – 1977PolarSequence analysisAdd BLAST26
Compositional biasi2264 – 2293PolyampholyteSequence analysisAdd BLAST30
Compositional biasi2312 – 2328PolyampholyteSequence analysisAdd BLAST17
Compositional biasi2454 – 2481PolarSequence analysisAdd BLAST28
Compositional biasi2482 – 2498PolyampholyteSequence analysisAdd BLAST17
Compositional biasi2518 – 2543PolarSequence analysisAdd BLAST26
Compositional biasi2718 – 2733BasicSequence analysisAdd BLAST16
Compositional biasi2734 – 2758PolyampholyteSequence analysisAdd BLAST25
Compositional biasi2969 – 2992PolarSequence analysisAdd BLAST24
Compositional biasi3009 – 3039PolarSequence analysisAdd BLAST31

Keywords - Domaini

Coiled coilSequence analysis, Zinc-fingerPROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
KOG1844 Eukaryota
COG2940 LUCA

Ensembl GeneTree

More...
GeneTreei
ENSGT00940000168747

Identification of Orthologs from Complete Genome Data

More...
OMAi
TSTRCAC

Database of Orthologous Groups

More...
OrthoDBi
147824at2759

Family and domain databases

Gene3D Structural and Functional Annotation of Protein Families

More...
Gene3Di
3.30.40.10, 1 hit

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR001214 SET_dom
IPR019786 Zinc_finger_PHD-type_CS
IPR011011 Znf_FYVE_PHD
IPR001965 Znf_PHD
IPR019787 Znf_PHD-finger
IPR013083 Znf_RING/FYVE/PHD

Pfam protein domain database

More...
Pfami
View protein in Pfam
PF00628 PHD, 1 hit
PF00856 SET, 1 hit

Simple Modular Architecture Research Tool; a protein domain database

More...
SMARTi
View protein in SMART
SM00249 PHD, 1 hit
SM00317 SET, 1 hit

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF57903 SSF57903, 1 hit

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS01359 ZF_PHD_1, 1 hit
PS50016 ZF_PHD_2, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>. The information is filed in different subsections. The current subsections and their content are listed below:<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

Q9VUB5-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MPMSSHDSVF VEPAVSSSGG GSTSSINRIG VASGPQPPPP HIVIDGSSLS
60 70 80 90 100
TQAQLRIMQR RMSISTRQIL SASQSQSINQ SQKYAVRTAA GTGALAAGAA
110 120 130 140 150
SSGSSGQELI NPQIYKIVTT DGSTSNVIID ASAAAPPHNS KLLLSNLTVL
160 170 180 190 200
SKQAPVQGAA GQQQQQLNYL GAKSLPYVSA SPAKTQQQPQ KFGSISAFKA
210 220 230 240 250
QHQQQQQHPH ATLQKVTLGS RVATRLQSYV PASPSQIMVQ PAQPKYVNAT
260 270 280 290 300
ATTIGGNAAL LKKANQKITV KSVSNMSQQQ QQQQQQQQQQ LLQAQQLKTF
310 320 330 340 350
ITQQQQQQTY KAGAKAKFVK QTTALSIAAL PQQQQQTTYA KQSMVTTSTP
360 370 380 390 400
AKVTKLNSKY VQQQISLPQG TQLQHKASPN VTGGGYLLQQ SQAAVGGTIK
410 420 430 440 450
FVNSHGTVIQ QHPQQQQATK RTHYNSSGSS DNEQHAVANS SLITDDVMIV
460 470 480 490 500
NGTQMTDELS ARILQSMAQK SFSQQQRFHQ VPATGSGNMP PPTQIIYSNS
510 520 530 540 550
TSNGAAASSP GGNASGNMLL AHYQAAGTKP VSSASFITVT GTPPVTVATT
560 570 580 590 600
PSVSISSHGF ASGSAAISSY MSSATAARRQ SVSAPSSRAV SLERKQHHQQ
610 620 630 640 650
LQHDVIGGGR KAPTVIEYYN KHGVNSIVGS SNNLAQSNSM SNLAGPRSNS
660 670 680 690 700
GSGFATTTPT PATPLHLTPV NVPVHVEAAP PSSPALVKGS SQPPAQPQQQ
710 720 730 740 750
QQQAHPLGPN QLNANDEELY IEEVRPVPVL TQDLRLQQLH AIMQDHTYAS
760 770 780 790 800
QQQQQQPQQA AGDTTNPGAA QQVQQPQQWS LGGIGVTVSG SQGTPTAVGG
810 820 830 840 850
YCSYFGQQIA RSQADDDAHS AISSSSRMGL ASTDIDPGEE TETAPEAEAE
860 870 880 890 900
DDSVTRCICE LTHDDGYMIC CDKCSAWQHV DCMGIDRQNI PEEYMCELCQ
910 920 930 940 950
PRAVDKARAR ALQRQKRKEH MLLVATQAAN GAAAVAAGTT LSGGLGSGLP
960 970 980 990 1000
MSEELQHRLA SGLNGGFATG TGMSKKSKKT KENSGSTSTL KKTKKSAVGM
1010 1020 1030 1040 1050
GGEKNASGSG TPTGSSGKTS KKSSKRKSKS GGDGSSGGGS SPALTAAEKH
1060 1070 1080 1090 1100
AANLRQWIEN YEYAVTNHYS PELRARLHAI QKQPSLLQSI QNTENKALRQ
1110 1120 1130 1140 1150
IQQQLSTAGS AEQLEQRAQL IPYAGAKVLI SSVDLSPHAP IHELRGKYML
1160 1170 1180 1190 1200
TTQFRTQNPT VNMNTPPPSN YLNSFKAHKT PGQFVFFYQL PGVEAPMQTL
1210 1220 1230 1240 1250
RPDGSVPQVA QQPPSYLKGP EVCVDTRTYG NDARFVRRSC RPNAELQHYF
1260 1270 1280 1290 1300
EKGTLHLYIV ALTHIRAQTE ITIRHEPHDL TAVEQKKSHA AVIQPTSTRC
1310 1320 1330 1340 1350
ACDMGSDCLF ALPLAVQQQL QAPPTQPRSS HRNKAAAAAA AAAAANSAAA
1360 1370 1380 1390 1400
IQLTMGLGVG ATVAAGASVL PNSRNRSTSS SGESSQMGLN SPQLGQLNLG
1410 1420 1430 1440 1450
FKTSVTATSL TAPVPGVHCN NSGGSSSSSN NSCSVSMSSV LHDSGICTSS
1460 1470 1480 1490 1500
SSPSVSIPSP TPTQMQSPTL QQHPQQIPQQ QLSLLQRSPT QQHQQQILAA
1510 1520 1530 1540 1550
LPTPMLTPML SPQLPKPAQQ QAHVVLPQSQ QTSLLQQQQS QQSQEPLAVI
1560 1570 1580 1590 1600
AAAAAAQQPM ATYFVRQPQQ QQQQQSPKPQ ALVAQQQHVV GAQQQQHFLQ
1610 1620 1630 1640 1650
QQQKQQQQQM ADEARMAVSA LQTLHAAPTS HIVSPIKVAA VQQQSQPQQQ
1660 1670 1680 1690 1700
QQNTHQQPHN QQAVQQQSNQ LQQQQSQQPN YPQSPQRQQK PQPVQHQPQI
1710 1720 1730 1740 1750
VISTGAQAIP ATMPTKLSSP TKSAAPVISN NNITVSAQSS VVGGKKTPAK
1760 1770 1780 1790 1800
HPQQQQQQQQ QPVTPVSAAT APAATPSSSE SKEDDVSASS TTTPTTRTPA
1810 1820 1830 1840 1850
KDKPKQSRED RKLEAILRAI EKMEKQEARG KKDTRQSSGG KRQASNSPAS
1860 1870 1880 1890 1900
PNKRNSSNSI SEDVETPTST NSAAAAAQRR NKKKRKVSRS LNNNTNGLGS
1910 1920 1930 1940 1950
GGGSNNKRRK SIVVESDGES HALTNSESED QGQHPQSHHS GSEDQAAGLL
1960 1970 1980 1990 2000
LALAHNNSSP NEPFKSPLSQ SHSLPATPAS VSSACLLIEA AMGPLQQQPA
2010 2020 2030 2040 2050
PASASPSLAE FKYPPGGAKT KKSLMSSWFQ QAEQQHASGL DSLVQAAMSE
2060 2070 2080 2090 2100
INGEREQLQR QPQGESLPAP ALLKVEQFIH QAESTTAVPA REQLHLPLQN
2110 2120 2130 2140 2150
NSSVKKRWLR QAISEETTPV DELQQSQNQS VTATPSPQPV PTVSPLANGF
2160 2170 2180 2190 2200
STPLKKRRLV VVSNGTNVES DETHIDVIGE PKDEAEENVA MTELKVEIEN
2210 2220 2230 2240 2250
HHQEQDDDVD ILRSPSPGTH QIVAEDNLVK IEPEDTSAAA DDVKIDVERE
2260 2270 2280 2290 2300
ESQACDKFEE MVKVKREEEE QREKEIKQLQ ERQEHEQPKV EPAPVEPKLE
2310 2320 2330 2340 2350
NTVAKAEPKV EPSQEIVSKK EPTKVEPKPG ESLLRSTATV TATPTAATIA
2360 2370 2380 2390 2400
ATTLLDVSKV AFKTRPPLKL EDEPQKKKPK LESILPAPVA TVPPVSVPPI
2410 2420 2430 2440 2450
PAASNATTSA VTNTAAASLT TTTAPSSTKN LTEHDIQERL LSFHAANISY
2460 2470 2480 2490 2500
LQSRNKKATA ALTSASPSQK SNSSSGGSGT ESKKSSKDKD EKRDKEKQLK
2510 2520 2530 2540 2550
KSKKEKKKSK DKEKQKAAVN VNSTSQIVDT KKKTTQPSKP DSKSSIAPVL
2560 2570 2580 2590 2600
VPPSLPVATA NGKTKHTAYN NVDQQQQQQM RRRTMSMCIT PVTPTPVVTP
2610 2620 2630 2640 2650
SPLHGTPPST KKRQTNFEQE LTKPNSQILS SSILLNSSKG LGLPLAAPTV
2660 2670 2680 2690 2700
VSVPTAVQQQ QHRKENNHQE ATPASGGPMS LAAAIASGKL NAISRRRESM
2710 2720 2730 2740 2750
CGSRQQQALI AAALKKEKKE KKKSKKKDRE KQKHDKQKGK EKEREKDKEK
2760 2770 2780 2790 2800
DNKQKTNHIQ KPAHPTTVPA NSMPISAPAP VPVLVPTPVT TPKAAPIPVL
2810 2820 2830 2840 2850
ITQPTPSPIH VTQPLVNNCS TKVASLPFYN TIYGKLQDPS TPTSSPIPVT
2860 2870 2880 2890 2900
NTMPSLAEYL ESTKSKTTAL SAVKPIGIAA VTPLSSAITP AKVAPSSLEM
2910 2920 2930 2940 2950
PPPATTPLKL YTRTASHDPR LNPMLTVPDP TPMPKRKLSI SEYRMRHRPS
2960 2970 2980 2990 3000
VDTAPTTPTT PTTPTTPTTP PGSNKDRSFA KPQTINKCSL QSPERFQAAI
3010 3020 3030 3040 3050
RERRNSISAH HPQQNAHHNL NNNKGGISNK SGSSSGNHLQ QALGVAGGRL
3060 3070 3080 3090 3100
QSKNAIVDPA ATTLSTVNSI LSTAQKLHMF DDKPKGGHFN AAPTLLEQQQ
3110 3120 3130 3140
EKMSERSRCL QRTISCDSRV IERLGTGAAA GALEKVTTAS TRRDAV
Length:3,146
Mass (Da):336,444
Last modified:October 1, 2002 - v3
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i81EEAC5C308FEC31
GO

Sequence databases

Select the link destinations:

EMBL nucleotide sequence database

More...
EMBLi

GenBank nucleotide sequence database

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GenBanki

DNA Data Bank of Japan; a nucleotide sequence database

More...
DDBJi
Links Updated
AE014296 Genomic DNA Translation: AAF49773.3
AE014296 Genomic DNA Translation: AGB94512.1

NCBI Reference Sequences

More...
RefSeqi
NP_001261819.1, NM_001274890.1
NP_648681.1, NM_140424.2

Genome annotation databases

Ensembl metazoan genome annotation project

More...
EnsemblMetazoai
FBtr0075768; FBpp0075510; FBgn0036398
FBtr0333050; FBpp0305264; FBgn0036398

Database of genes from NCBI RefSeq genomes

More...
GeneIDi
39551

KEGG: Kyoto Encyclopedia of Genes and Genomes

More...
KEGGi
dme:Dmel_CG9007

UCSC genome browser

More...
UCSCi
CG9007-RA d. melanogaster

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE014296 Genomic DNA Translation: AAF49773.3
AE014296 Genomic DNA Translation: AGB94512.1
RefSeqiNP_001261819.1, NM_001274890.1
NP_648681.1, NM_140424.2

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

SWISS-MODEL Interactive Workspace

More...
SWISS-MODEL-Workspacei
Submit a new modelling project...

Protein-protein interaction databases

IntActiQ9VUB5, 5 interactors
STRINGi7227.FBpp0075510

Proteomic databases

PRIDEiQ9VUB5

Genome annotation databases

EnsemblMetazoaiFBtr0075768; FBpp0075510; FBgn0036398
FBtr0333050; FBpp0305264; FBgn0036398
GeneIDi39551
KEGGidme:Dmel_CG9007
UCSCiCG9007-RA d. melanogaster

Organism-specific databases

Comparative Toxicogenomics Database

More...
CTDi
39551
FlyBaseiFBgn0036398 upSET

Phylogenomic databases

eggNOGiKOG1844 Eukaryota
COG2940 LUCA
GeneTreeiENSGT00940000168747
OMAiTSTRCAC
OrthoDBi147824at2759

Enzyme and pathway databases

ReactomeiR-DME-8936459 RUNX1 regulates genes involved in megakaryocyte differentiation and platelet function

Miscellaneous databases

ChiTaRS: a database of human, mouse and fruit fly chimeric transcripts and RNA-sequencing data

More...
ChiTaRSi
upSET fly

Database of phenotypes from RNA interference screens in Drosophila and Homo sapiens

More...
GenomeRNAii
39551

Gene expression databases

BgeeiFBgn0036398 Expressed in 30 organ(s), highest expression level in embryo

Family and domain databases

Gene3Di3.30.40.10, 1 hit
InterProiView protein in InterPro
IPR001214 SET_dom
IPR019786 Zinc_finger_PHD-type_CS
IPR011011 Znf_FYVE_PHD
IPR001965 Znf_PHD
IPR019787 Znf_PHD-finger
IPR013083 Znf_RING/FYVE/PHD
PfamiView protein in Pfam
PF00628 PHD, 1 hit
PF00856 SET, 1 hit
SMARTiView protein in SMART
SM00249 PHD, 1 hit
SM00317 SET, 1 hit
SUPFAMiSSF57903 SSF57903, 1 hit
PROSITEiView protein in PROSITE
PS01359 ZF_PHD_1, 1 hit
PS50016 ZF_PHD_2, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiQ9VUB5_DROME
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: Q9VUB5
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: May 1, 2000
Last sequence update: October 1, 2002
Last modified: October 16, 2019
This is version 161 of the entry and version 3 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
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