UniRef

UniProtKB and UniParc members

Published: November 13, 2019

Cluster ID: UniRef90_P11087 (built on seed sequenceⁱ UPI0004ED280D)

>UniRef90_P11087 Collagen alpha-1(I) chain n=24 Tax=cellular organisms TaxID=131567 RepID=CO1A1_MOUSE MFSFVDLRLLLLLGATALLTHGQEDIPEVSCIHNGLRVPNGETWKPEVCLICICHNGTAV CDDVQCNEELDCPNPQRREGECCAFCPEEYVSPNSEDVGVEGPKGDPGPQGPRGPVGPPG RDGIPGQPGLPGPPGPPGPPGPPGLGGNFASQMSYGYDEKSAGVSVPGPMGPSGPRGLPG PPGAPGPQGFQGPPGEPGEPGGSGPMGPRGPPGPPGKNGDDGEAGKPGRPGERGPPGPQG ARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGSPGENGAPGQMGPRGLPGERG RPGPPGTAGARGNDGAVGAAGPPGPTGPTGPPGFPGAVGAKGEAGPQGARGSEGPQGVRG EPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAPGFPGARGPSGPQGPSGPPGPKG NSGEPGAPGNKGDTGAKGEPGATGVQGPPGPAGEEGKRGARGEPGPSGLPGPPGERGGPG SRGFPGADGVAGPKGPSGERGAPGPAGPKGSPGEAGRPGEAGLPGAKGLTGSPGSPGPDG KTGPPGPAGQDGRPGPAGPPGARGQAGVMGFPGPKGTAGEPGKAGERGLPGPPGAVGPAG KDGEAGAQGAPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEAGKPGEQGVPGDLGAPG PSGARGERGFPGERGVQGPPGPAGPRGNNGAPGNDGAKGDTGAPGAPGSQGAPGLQGMPG ERGAAGLPGPKGDRGDAGPKGADGSPGKDGARGLTGPIGPPGPAGAPGDKGEAGPSGPPG PTGARGAPGDRGEAGPPGPAGFAGPPGADGQPGAKGEPGDTGVKGDAGPPGPAGPAGPPG PIGNVGAPGPKGPRGAAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPVGKEGGKGPRG ETGPAGRPGEVGPPGPPGPAGEKGSPGADGPAGSPGTPGPQGIAGQRGVVGLPGQRGERG FPGLPGPSGEPGKQGPSGSSGERGPPGPMGPPGLAGPPGESGREGSPGAEGSPGRDGAPG AKGDRGETGPAGPPGAPGAPGAPGPVGPAGKNGDRGETGPAGPAGPIGPAGARGPAGPQG PRGDKGETGEQGDRGIKGHRGFSGLQGPPGSPGSPGEQGPSGASGPAGPRGPPGSAGSPG KDGLNGLPGPIGPPGPRGRTGDSGPAGPPGPPGPPGPPGPPSGGYDFSFLPQPPQEKSQD GGRYYRADDANVVRDRDLEVDTTLKSLSQQIENIRSPEGSRKNPARTCRDLKMCHSDWKS GEYWIDPNQGCNLDAIKVYCNMETGQTCVFPTQPSVPQKNWYISPNPKEKKHVWFGESMT DGFPFEYGSEGSDPADVAIQLTFLRLMSTEASQNITYHCKNSVAYMDQQTGNLKKALLLQ GSNEIELRGEGNSRFTYSTLVDGCTSHTGTWGKTVIEYKTTKTSRLPIIDVAPLDIGAPD QEFGLDIGPACFV

Members

Expand cluster to 50% identity.

List component clusters with 100% identity.

1 to 24 of 24 Show

Cluster members	Entry name	Protein names	Organisms	Organism IDs	Related clusters	Length	Role

P11087	CO1A1_MOUSE	Collagen alpha-1(I) chain	Mus musculus (Mouse)	10090	UniRef100_P11087	1,453	Representative
P02454	CO1A1_RAT	Collagen alpha-1(I) chain	Rattus norvegicus (Rat)	10116	UniRef100_P02454	1,453
A0A1X9FNI7	A0A1X9FNI7_9MURI	Type I collagen alpha 1 chain (Fragment)	Mus sp.	10095	UniRef100_P11087	323
Q99LL6	Q99LL6_MOUSE	Col1a1 protein (Fragment)	Mus musculus (Mouse)	10090	UniRef100_P11087	589
Q61022	Q61022_MOUSE	Alpha-1 type 1 collagen (Fragment)	Mus musculus (Mouse)	10090	UniRef100_P11087	92
Q64353	Q64353_MOUSE	Alpha-1 type I collagen, exons 1 and 2 (Fragment)	Mus musculus (Mouse)	10090	UniRef100_P11087	29
A0A1S3GXN3	A0A1S3GXN3_DIPOR	collagen alpha-1(I) chain	Dipodomys ordii (Ord's kangaroo rat)	10020	UniRef100_A0A1S3GXN3	1,462
A0A5E4BST3	A0A5E4BST3_MARMO	Uncharacterized protein	Marmota monax (Woodchuck)	9995	UniRef100_A0A5E4BST3	1,462
A0A328B4W1	A0A328B4W1_9CAUL	Uncharacterized protein (Fragment)	Phenylobacterium kunshanense	1445034	UniRef100_P02454	180
A0A068F650	A0A068F650_RAT	Type I-alpha 1 collagen (Fragment)	Rattus norvegicus (Rat)	10116	UniRef100_P02454	233
A0A1U7QKK9	A0A1U7QKK9_MESAU	collagen alpha-1(I) chain isoform X1	Mesocricetus auratus (Golden hamster)	10036	UniRef100_A0A1U7QKK9	1,453
P11087-2	Isoform 2 of CO1A1_MOUSE	2	Mus musculus (Mouse)	10090	UniRef100_P11087-2	1,225
UPI0004ED280D		collagen alpha-1(I) chain isoform X1	Nannospalax galili (Northern Israeli blind subterranean mole rat) (Spalax galili)	1026970	UniRef100_UPI0004ED280D	1,463	Seed
UPI000E55D284		collagen alpha-1(I) chain	Urocitellus parryii (Arctic ground squirrel) (Spermophilus parryii)	9999	UniRef100_UPI000E55D284	1,462
UPI00045E115D		collagen alpha-1(I) chain	Orycteropus afer afer	1230840	UniRef100_UPI00045E115D	1,460
UPI000A30C2A9		collagen alpha-1(I) chain	Mus pahari (Gairdner's shrew-mouse) (Coelomys pahari)	10093	UniRef100_UPI000A30C2A9	1,453
UPI000A317529		collagen alpha-1(I) chain	Mus caroli (Ryukyu mouse) (Ricefield mouse)	10089	UniRef100_UPI000A317529	1,452
UPI00081A2124		collagen alpha-1(I) chain isoform X2	Nannospalax galili (Northern Israeli blind subterranean mole rat) (Spalax galili)	1026970	UniRef100_UPI00081A2124	1,373
UPI00038C4802		collagen alpha-1(I) chain	Ictidomys tridecemlineatus (Thirteen-lined ground squirrel) (Spermophilus tridecemlineatus)	43179	UniRef100_UPI00038C4802	1,349
UPI00111C6553		collagen alpha-1(I) chain isoform X3	Nannospalax galili (Northern Israeli blind subterranean mole rat) (Spalax galili)	1026970	UniRef100_UPI00111C6553	1,244
UPI00111C3A8F		collagen alpha-1(I) chain isoform X4	Nannospalax galili (Northern Israeli blind subterranean mole rat) (Spalax galili)	1026970	UniRef100_UPI00111C3A8F	1,202
UPI0007629245		collagen alpha-1(I) chain isoform X2	Marmota marmota marmota (Alpine marmot)	9994	UniRef100_UPI0007629245	1,201
UPI001113D335		collagen-like protein	Acinetobacter baumannii	470	UniRef100_UPI001113D335	107
UPI00109FA4C8		collagen alpha-1(I) chain	Grammomys surdaster	491861	UniRef100_UPI001113D335	1,454

Sequence

Representative sequenceⁱ		Length	Mass (Da)	Tools
P11087 Checksumⁱ: 0B7F06BBB9A1D5EA	FASTA	1,453	138,033
10 20 30 40 50 MFSFVDLRLL LLLGATALLT HGQEDIPEVS CIHNGLRVPN GETWKPEVCL 60 70 80 90 100 ICICHNGTAV CDDVQCNEEL DCPNPQRREG ECCAFCPEEY VSPNSEDVGV 110 120 130 140 150 EGPKGDPGPQ GPRGPVGPPG RDGIPGQPGL PGPPGPPGPP GPPGLGGNFA 160 170 180 190 200 SQMSYGYDEK SAGVSVPGPM GPSGPRGLPG PPGAPGPQGF QGPPGEPGEP 210 220 230 240 250 GGSGPMGPRG PPGPPGKNGD DGEAGKPGRP GERGPPGPQG ARGLPGTAGL 260 270 280 290 300 PGMKGHRGFS GLDGAKGDAG PAGPKGEPGS PGENGAPGQM GPRGLPGERG 310 320 330 340 350 RPGPPGTAGA RGNDGAVGAA GPPGPTGPTG PPGFPGAVGA KGEAGPQGAR 360 370 380 390 400 GSEGPQGVRG EPGPPGPAGA AGPAGNPGAD GQPGAKGANG APGIAGAPGF 410 420 430 440 450 PGARGPSGPQ GPSGPPGPKG NSGEPGAPGN KGDTGAKGEP GATGVQGPPG 460 470 480 490 500 PAGEEGKRGA RGEPGPSGLP GPPGERGGPG SRGFPGADGV AGPKGPSGER 510 520 530 540 550 GAPGPAGPKG SPGEAGRPGE AGLPGAKGLT GSPGSPGPDG KTGPPGPAGQ 560 570 580 590 600 DGRPGPAGPP GARGQAGVMG FPGPKGTAGE PGKAGERGLP GPPGAVGPAG 610 620 630 640 650 KDGEAGAQGA PGPAGPAGER GEQGPAGSPG FQGLPGPAGP PGEAGKPGEQ 660 670 680 690 700 GVPGDLGAPG PSGARGERGF PGERGVQGPP GPAGPRGNNG APGNDGAKGD 710 720 730 740 750 TGAPGAPGSQ GAPGLQGMPG ERGAAGLPGP KGDRGDAGPK GADGSPGKDG 760 770 780 790 800 ARGLTGPIGP PGPAGAPGDK GEAGPSGPPG PTGARGAPGD RGEAGPPGPA 810 820 830 840 850 GFAGPPGADG QPGAKGEPGD TGVKGDAGPP GPAGPAGPPG PIGNVGAPGP 860 870 880 890 900 KGPRGAAGPP GATGFPGAAG RVGPPGPSGN AGPPGPPGPV GKEGGKGPRG 910 920 930 940 950 ETGPAGRPGE VGPPGPPGPA GEKGSPGADG PAGSPGTPGP QGIAGQRGVV 960 970 980 990 1000 GLPGQRGERG FPGLPGPSGE PGKQGPSGSS GERGPPGPMG PPGLAGPPGE 1010 1020 1030 1040 1050 SGREGSPGAE GSPGRDGAPG AKGDRGETGP AGPPGAPGAP GAPGPVGPAG 1060 1070 1080 1090 1100 KNGDRGETGP AGPAGPIGPA GARGPAGPQG PRGDKGETGE QGDRGIKGHR 1110 1120 1130 1140 1150 GFSGLQGPPG SPGSPGEQGP SGASGPAGPR GPPGSAGSPG KDGLNGLPGP 1160 1170 1180 1190 1200 IGPPGPRGRT GDSGPAGPPG PPGPPGPPGP PSGGYDFSFL PQPPQEKSQD 1210 1220 1230 1240 1250 GGRYYRADDA NVVRDRDLEV DTTLKSLSQQ IENIRSPEGS RKNPARTCRD 1260 1270 1280 1290 1300 LKMCHSDWKS GEYWIDPNQG CNLDAIKVYC NMETGQTCVF PTQPSVPQKN 1310 1320 1330 1340 1350 WYISPNPKEK KHVWFGESMT DGFPFEYGSE GSDPADVAIQ LTFLRLMSTE 1360 1370 1380 1390 1400 ASQNITYHCK NSVAYMDQQT GNLKKALLLQ GSNEIELRGE GNSRFTYSTL 1410 1420 1430 1440 1450 VDGCTSHTGT WGKTVIEYKT TKTSRLPIID VAPLDIGAPD QEFGLDIGPA CFV

Representative sequenceⁱ

Length

Mass (Da)

Tools

P11087

Checksumⁱ: 0B7F06BBB9A1D5EA

FASTA

1,453

138,033

        10         20         30         40         50
MFSFVDLRLL LLLGATALLT HGQEDIPEVS CIHNGLRVPN GETWKPEVCL 
        60         70         80         90        100
ICICHNGTAV CDDVQCNEEL DCPNPQRREG ECCAFCPEEY VSPNSEDVGV 
       110        120        130        140        150
EGPKGDPGPQ GPRGPVGPPG RDGIPGQPGL PGPPGPPGPP GPPGLGGNFA 
       160        170        180        190        200
SQMSYGYDEK SAGVSVPGPM GPSGPRGLPG PPGAPGPQGF QGPPGEPGEP 
       210        220        230        240        250
GGSGPMGPRG PPGPPGKNGD DGEAGKPGRP GERGPPGPQG ARGLPGTAGL 
       260        270        280        290        300
PGMKGHRGFS GLDGAKGDAG PAGPKGEPGS PGENGAPGQM GPRGLPGERG 
       310        320        330        340        350
RPGPPGTAGA RGNDGAVGAA GPPGPTGPTG PPGFPGAVGA KGEAGPQGAR 
       360        370        380        390        400
GSEGPQGVRG EPGPPGPAGA AGPAGNPGAD GQPGAKGANG APGIAGAPGF 
       410        420        430        440        450
PGARGPSGPQ GPSGPPGPKG NSGEPGAPGN KGDTGAKGEP GATGVQGPPG 
       460        470        480        490        500
PAGEEGKRGA RGEPGPSGLP GPPGERGGPG SRGFPGADGV AGPKGPSGER 
       510        520        530        540        550
GAPGPAGPKG SPGEAGRPGE AGLPGAKGLT GSPGSPGPDG KTGPPGPAGQ 
       560        570        580        590        600
DGRPGPAGPP GARGQAGVMG FPGPKGTAGE PGKAGERGLP GPPGAVGPAG 
       610        620        630        640        650
KDGEAGAQGA PGPAGPAGER GEQGPAGSPG FQGLPGPAGP PGEAGKPGEQ 
       660        670        680        690        700
GVPGDLGAPG PSGARGERGF PGERGVQGPP GPAGPRGNNG APGNDGAKGD 
       710        720        730        740        750
TGAPGAPGSQ GAPGLQGMPG ERGAAGLPGP KGDRGDAGPK GADGSPGKDG 
       760        770        780        790        800
ARGLTGPIGP PGPAGAPGDK GEAGPSGPPG PTGARGAPGD RGEAGPPGPA 
       810        820        830        840        850
GFAGPPGADG QPGAKGEPGD TGVKGDAGPP GPAGPAGPPG PIGNVGAPGP 
       860        870        880        890        900
KGPRGAAGPP GATGFPGAAG RVGPPGPSGN AGPPGPPGPV GKEGGKGPRG 
       910        920        930        940        950
ETGPAGRPGE VGPPGPPGPA GEKGSPGADG PAGSPGTPGP QGIAGQRGVV 
       960        970        980        990       1000
GLPGQRGERG FPGLPGPSGE PGKQGPSGSS GERGPPGPMG PPGLAGPPGE 
      1010       1020       1030       1040       1050
SGREGSPGAE GSPGRDGAPG AKGDRGETGP AGPPGAPGAP GAPGPVGPAG 
      1060       1070       1080       1090       1100
KNGDRGETGP AGPAGPIGPA GARGPAGPQG PRGDKGETGE QGDRGIKGHR 
      1110       1120       1130       1140       1150
GFSGLQGPPG SPGSPGEQGP SGASGPAGPR GPPGSAGSPG KDGLNGLPGP 
      1160       1170       1180       1190       1200
IGPPGPRGRT GDSGPAGPPG PPGPPGPPGP PSGGYDFSFL PQPPQEKSQD 
      1210       1220       1230       1240       1250
GGRYYRADDA NVVRDRDLEV DTTLKSLSQQ IENIRSPEGS RKNPARTCRD 
      1260       1270       1280       1290       1300
LKMCHSDWKS GEYWIDPNQG CNLDAIKVYC NMETGQTCVF PTQPSVPQKN 
      1310       1320       1330       1340       1350
WYISPNPKEK KHVWFGESMT DGFPFEYGSE GSDPADVAIQ LTFLRLMSTE 
      1360       1370       1380       1390       1400
ASQNITYHCK NSVAYMDQQT GNLKKALLLQ GSNEIELRGE GNSRFTYSTL 
      1410       1420       1430       1440       1450
VDGCTSHTGT WGKTVIEYKT TKTSRLPIID VAPLDIGAPD QEFGLDIGPA 

CFV

UniRef - Cluster: Collagen alpha-1(I) chain (90%)

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Sequence

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Proteomes

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Supporting data

UniRef - Cluster: Collagen alpha-1(I) chain (90%)

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