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The annotation and conditions in this rule are derived from the following entries: P9WHJ5 (RBPA_MYCTU), Q9RKY0 (RBPA_STRCO), A0QZ11 (RBPA_MYCS2)

If a protein meets these conditions... i

Common conditions

Special conditions

    • Subsequence at position 38 - 38 aligns to "H" in entry Q9RKY0 Subsequence at position 59 - 59 aligns to "C" in entry Q9RKY0 Subsequence at position 56 - 56 aligns to "C" in entry Q9RKY0 Subsequence at position 34 - 34 aligns to "C" in entry Q9RKY0
  • Subsequence at position 38 - 38 aligns to "H" in entry Q9RKY0 (applies "Zinc") Subsequence at position 59 - 59 aligns to "C" in entry Q9RKY0 (applies "Zinc") Subsequence at position 56 - 56 aligns to "C" in entry Q9RKY0 (applies "Zinc") Subsequence at position 34 - 34 aligns to "C" in entry Q9RKY0 (applies "Zinc")

... then these annotations are applied i

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namei

  • Recommended name:
    RNA polymerase-binding protein RbpA

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section indicates the name(s) of the gene(s) that code for the protein sequence(s) described in the entry. Four distinct tokens exist: ‘Name’, ‘Synonyms’, ‘Ordered locus names’ and ‘ORF names’.<p><a href='/help/gene_name' target='_top'>More...</a></p>Gene namei

  • Name:rbpA

<p>This subsection of the <a href="http://www.uniprot.org/help/interaction_section">'Interaction'</a> section provides information about the protein quaternary structure and interaction(s) with other proteins or protein complexes (with the exception of physiological receptor-ligand interactions which are annotated in the <a href="http://www.uniprot.org/help/function_section">'Function'</a> section).<p><a href='/help/subunit_structure' target='_top'>More...</a></p>Subunit structurei

  • Forms a complex with the RNAP catalytic core and with free principal sigma factors.

<p>This subsection of the ‘Function’ section provides information relevant to cofactors. A cofactor is any non-protein substance required for a protein to be catalytically active. Some cofactors are inorganic, such as the metal atoms zinc, iron, and copper in various oxidation states. Others, such as most vitamins, are organic.<p><a href='/help/cofactor' target='_top'>More...</a></p>Cofactori

<p>This subsection of the <a href="http://www.uniprot.org/help/function_section">Function</a> describes the function(s) of a protein.<p><a href='/help/function' target='_top'>More...</a></p>Functioni

  • Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters.

<p>This subsection of the ‘Family and domains’ section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

<p>This subsection of the <a href="http://www.uniprot.org/help/function_section">Function</a> section indicates at which position the protein binds a given metal ion. The nature of the metal is indicated in the ‘Description’ field.<p><a href='/help/metal' target='_top'>More...</a></p>Metal bindingi

  • Zinc (to residues corresponding to position 38)
  • Zinc (to residues corresponding to position 59)
  • Zinc (to residues corresponding to position 56)
  • Zinc (to residues corresponding to position 34)

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywordsi

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO (Gene Ontology) termsi

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