RDF/XMLNTriplesTurtleShow queryShare
SubjectPredicateObject
http://purl.uniprot.org/citations/17900276http://www.w3.org/1999/02/22-rdf-syntax-ns#typehttp://purl.uniprot.org/core/Journal_Citation
http://purl.uniprot.org/citations/17900276http://www.w3.org/1999/02/22-rdf-syntax-ns#typehttp://purl.uniprot.org/core/Journal_Citation
http://purl.uniprot.org/citations/17900276http://www.w3.org/2000/01/rdf-schema#comment"

Background

RhD and RhCE are structurally related to ammonium transporter proteins, yet their physiologic function remains unclear. Recent three-dimensional homology modeling with Escherichia coli AmtB as a template defined a putative transmembraneous channel. Three RhD variants with amino acid substitutions located at the extracellular channel aperture are described.

Study design and methods

Blood samples were selected because of serologic abnormalities. RHD, RHCE, and LW nucleotide sequences were determined from genomic DNA. D epitope patterns were established with monoclonal anti-D panels. Three-dimensional Rh structures were calculated by alignment to AmtB.

Results

The RHD allele DCS-1 was found to carry the two amino acid substitutions F223V (667T > G) and A226P (676G > C) caused by missense mutations in RHD exon 5. This study compared DCS-1 with the D variants DFV (F223V) and DCS-2 (A226P), harboring solely one or the other of the two substitutions. All three D variants were associated with a cDE haplotype. The antigen densities were approximately 3,000 D antigens per red blood cell for DCS-1, 800 for DCS-2, and 9,300 for DFV. DCS-1 and DCS-2 were partial D, because they lacked distinct epitopes. DFV presented as an almost normal D phenotype; the sample contained allo-anti-LW(a). The D(w) antigen was absent from DCS-1, DFV, and DAU-4, but expressed by DAU-5.

Conclusion

DCS-1, DCS-2, and DFV carry amino acid substitutions at the extracellular vestibule, visualized by 3-dimensional modeling. Proline at position 226 greatly influenced the D antigen density and may reduce the RhD membrane integration. Although the F223V substitution is regarded as the initial event in the evolution of the weak D Type 4 cluster, the current DFV allele probably evolved independently, as evident from different RHCE haplotypes."xsd:string
http://purl.uniprot.org/citations/17900276http://purl.org/dc/terms/identifier"doi:10.1111/j.1537-2995.2007.01506.x"xsd:string
http://purl.uniprot.org/citations/17900276http://purl.org/dc/terms/identifier"doi:10.1111/j.1537-2995.2007.01506.x"xsd:string
http://purl.uniprot.org/citations/17900276http://purl.uniprot.org/core/author"Doescher A."xsd:string
http://purl.uniprot.org/citations/17900276http://purl.uniprot.org/core/author"Doescher A."xsd:string
http://purl.uniprot.org/citations/17900276http://purl.uniprot.org/core/author"Wagner F.F."xsd:string
http://purl.uniprot.org/citations/17900276http://purl.uniprot.org/core/author"Wagner F.F."xsd:string
http://purl.uniprot.org/citations/17900276http://purl.uniprot.org/core/author"Flegel W.A."xsd:string
http://purl.uniprot.org/citations/17900276http://purl.uniprot.org/core/author"Flegel W.A."xsd:string
http://purl.uniprot.org/citations/17900276http://purl.uniprot.org/core/author"von Zabern I."xsd:string
http://purl.uniprot.org/citations/17900276http://purl.uniprot.org/core/author"von Zabern I."xsd:string
http://purl.uniprot.org/citations/17900276http://purl.uniprot.org/core/author"Pisacka M."xsd:string
http://purl.uniprot.org/citations/17900276http://purl.uniprot.org/core/author"Pisacka M."xsd:string
http://purl.uniprot.org/citations/17900276http://purl.uniprot.org/core/author"Vytiskova J."xsd:string
http://purl.uniprot.org/citations/17900276http://purl.uniprot.org/core/author"Vytiskova J."xsd:string
http://purl.uniprot.org/citations/17900276http://purl.uniprot.org/core/date"2008"xsd:gYear
http://purl.uniprot.org/citations/17900276http://purl.uniprot.org/core/date"2008"xsd:gYear
http://purl.uniprot.org/citations/17900276http://purl.uniprot.org/core/name"Transfusion"xsd:string
http://purl.uniprot.org/citations/17900276http://purl.uniprot.org/core/name"Transfusion"xsd:string
http://purl.uniprot.org/citations/17900276http://purl.uniprot.org/core/pages"25-33"xsd:string
http://purl.uniprot.org/citations/17900276http://purl.uniprot.org/core/pages"25-33"xsd:string
http://purl.uniprot.org/citations/17900276http://purl.uniprot.org/core/title"DCS-1, DCS-2, and DFV share amino acid substitutions at the extracellular RhD protein vestibule."xsd:string
http://purl.uniprot.org/citations/17900276http://purl.uniprot.org/core/title"DCS-1, DCS-2, and DFV share amino acid substitutions at the extracellular RhD protein vestibule."xsd:string