RDF/XMLNTriplesTurtleShow queryShare
SubjectPredicateObject
http://purl.uniprot.org/citations/18065200http://www.w3.org/1999/02/22-rdf-syntax-ns#typehttp://purl.uniprot.org/core/Journal_Citation
http://purl.uniprot.org/citations/18065200http://www.w3.org/2000/01/rdf-schema#comment"HLA-DQB1 is widely considered to be the major histocompatibility complex (MHC) susceptibility gene for type 1 diabetes (T1D). However, since inheritance of the gene in T1D is recessive, the presence of the protective HLA-DQB1 0602 allele with normal nucleotide sequence in some patients raises the question of whether HLA-DQB1 is not the susceptibility locus itself but merely a good marker. HLA-DQB1 0602 is part of a conserved extended haplotype (CEH) [HLA-B7, SC31, DR2] (B7, DR2) with fixed DNA over more than 1Mb of genomic DNA that normally carries a protective allele at the true susceptibility locus. We postulated that, in patients with HLA-DQB1 0602, the protective allele at the susceptibility locus has been replaced by a susceptibility allele through an ancient crossover at meiosis centromeric to HLA-DQB1. We analyzed single nucleotide polymorphisms (SNPs) distinguishing the HLA-DQA2 (the first expressed gene centromeric to HLA-DQB1) allele on the normal HLA-B7, DR2 CEH from those on susceptibility CEHs in T1D patients and controls with HLA-DQB1 0602. All but 1 of 20 healthy control HLA-DQB1 0602 haplotypes had identical (consensus) first intron HLA-DQA2 5-SNP haplotypes. Fifteen of 19 patients with HLA-DQB1 0602 were homozygous for 1 or more HLA-DQA2 SNPs differing from consensus HLA-DQA2 SNPs, providing evidence of crossover involving the HLA-DQA2 locus. The remaining 4 patients were heterozygous at all positions and therefore uninformative. The loss of dominant protection usually associated with HLA-DQB1 0602 haplotypes is consistent with a locus centromeric to HLA-DQB1 being a major determinant of MHC-associated susceptibility, and perhaps the true T1D susceptibility locus."xsd:string
http://purl.uniprot.org/citations/18065200http://purl.org/dc/terms/identifier"doi:10.1016/j.jaut.2007.10.006"xsd:string
http://purl.uniprot.org/citations/18065200http://purl.uniprot.org/core/author"Kelly M.A."xsd:string
http://purl.uniprot.org/citations/18065200http://purl.uniprot.org/core/author"Eisenbarth G.S."xsd:string
http://purl.uniprot.org/citations/18065200http://purl.uniprot.org/core/author"Larsen C.E."xsd:string
http://purl.uniprot.org/citations/18065200http://purl.uniprot.org/core/author"Pugliese A."xsd:string
http://purl.uniprot.org/citations/18065200http://purl.uniprot.org/core/author"Alper C.A."xsd:string
http://purl.uniprot.org/citations/18065200http://purl.uniprot.org/core/author"Awdeh Z.L."xsd:string
http://purl.uniprot.org/citations/18065200http://purl.uniprot.org/core/author"Husain Z."xsd:string
http://purl.uniprot.org/citations/18065200http://purl.uniprot.org/core/date"2008"xsd:gYear
http://purl.uniprot.org/citations/18065200http://purl.uniprot.org/core/name"J Autoimmun"xsd:string
http://purl.uniprot.org/citations/18065200http://purl.uniprot.org/core/pages"266-272"xsd:string
http://purl.uniprot.org/citations/18065200http://purl.uniprot.org/core/title"The MHC type 1 diabetes susceptibility gene is centromeric to HLA-DQB1."xsd:string
http://purl.uniprot.org/citations/18065200http://purl.uniprot.org/core/volume"30"xsd:string
http://purl.uniprot.org/citations/18065200http://www.w3.org/2004/02/skos/core#exactMatchhttp://purl.uniprot.org/pubmed/18065200
http://purl.uniprot.org/citations/18065200http://xmlns.com/foaf/0.1/primaryTopicOfhttps://pubmed.ncbi.nlm.nih.gov/18065200
http://purl.uniprot.org/uniprot/#_A0A0E3DC97-mappedCitation-18065200http://www.w3.org/1999/02/22-rdf-syntax-ns#objecthttp://purl.uniprot.org/citations/18065200
http://purl.uniprot.org/uniprot/#_A0A0E3DC99-mappedCitation-18065200http://www.w3.org/1999/02/22-rdf-syntax-ns#objecthttp://purl.uniprot.org/citations/18065200
http://purl.uniprot.org/uniprot/#_A0A076L4M5-mappedCitation-18065200http://www.w3.org/1999/02/22-rdf-syntax-ns#objecthttp://purl.uniprot.org/citations/18065200
http://purl.uniprot.org/uniprot/#_A0A0A7C7I5-mappedCitation-18065200http://www.w3.org/1999/02/22-rdf-syntax-ns#objecthttp://purl.uniprot.org/citations/18065200
http://purl.uniprot.org/uniprot/#_A0A0A7C853-mappedCitation-18065200http://www.w3.org/1999/02/22-rdf-syntax-ns#objecthttp://purl.uniprot.org/citations/18065200
http://purl.uniprot.org/uniprot/#_A0A0A7CAC7-mappedCitation-18065200http://www.w3.org/1999/02/22-rdf-syntax-ns#objecthttp://purl.uniprot.org/citations/18065200
http://purl.uniprot.org/uniprot/#_A0A0A7CAE0-mappedCitation-18065200http://www.w3.org/1999/02/22-rdf-syntax-ns#objecthttp://purl.uniprot.org/citations/18065200
http://purl.uniprot.org/uniprot/#_A0A0A7CAE6-mappedCitation-18065200http://www.w3.org/1999/02/22-rdf-syntax-ns#objecthttp://purl.uniprot.org/citations/18065200