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http://purl.uniprot.org/citations/23289807http://www.w3.org/1999/02/22-rdf-syntax-ns#typehttp://purl.uniprot.org/core/Journal_Citation
http://purl.uniprot.org/citations/23289807http://www.w3.org/2000/01/rdf-schema#comment"

Purpose

To evaluate the association and interaction of single nucleotide polymorphisms in CFH and LOC387715/ARMS2 with age-related macular degeneration (AMD) in a Korean population.

Methods

A total of 114 exudative AMD patients and 240 normal subjects participated in the study. PCR and direct sequencing were used to screen SNPs in the CFH and in the LOC387715/ARMS2. Genotype and haplotype analyses were performed. Two-locus gene-gene interactions were evaluated by the data mining approach multifactor-dimensionality reduction method.

Results

The *C/*T genotype frequency of rs1061170 in CFH showed a significant difference (OR = 1.79). Genotype and allele frequencies of rs551397 (*C/*C, OR = 2.84; *C, OR = 1.67) and rs800292 (*G/*G, OR = 2.198; *G, OR = 1.676) in CFH, and rs10490924 (T/*T, OR = 12.45; *T, OR = 4.45) and rs2736911 (*C/*C, OR = 3.21; *C, OR = 2.71) in LOC387715/ARMS2 were significantly higher in patients. In the haplotype analysis, C-T of rs2736911-rs10490924 in LOC387715/ARMS2 (OR = 4.85) and C-G of rs551397-rs800292 in CFH (OR = 2.22) predisposed significantly to AMD. After cross-validation consistency (CVC) and permutation tests, we identified the 1 marker model (rs10490924), which has a prediction accuracy of 73.5%, and the two locus model, rs10490924_ rs800292, with 75.3% balanced accuracy in predicting AMD disease risk.

Conclusions

Korean individuals with the LOC387715/ARMS2 rs10490924, and to a lesser extent, CFH rs800292 variants might be at a greater risk for the development of exudative AMD. Furthermore, the risk of exudative AMD may increase significantly if these variants are both present in the two genes."xsd:string
http://purl.uniprot.org/citations/23289807http://purl.org/dc/terms/identifier"doi:10.3109/13816810.2012.749287"xsd:string
http://purl.uniprot.org/citations/23289807http://purl.uniprot.org/core/author"Kim H.S."xsd:string
http://purl.uniprot.org/citations/23289807http://purl.uniprot.org/core/author"Kim Y.H."xsd:string
http://purl.uniprot.org/citations/23289807http://purl.uniprot.org/core/author"Mok J.W."xsd:string
http://purl.uniprot.org/citations/23289807http://purl.uniprot.org/core/author"Joo C.K."xsd:string
http://purl.uniprot.org/citations/23289807http://purl.uniprot.org/core/date"2013"xsd:gYear
http://purl.uniprot.org/citations/23289807http://purl.uniprot.org/core/name"Ophthalmic Genet"xsd:string
http://purl.uniprot.org/citations/23289807http://purl.uniprot.org/core/pages"151-159"xsd:string
http://purl.uniprot.org/citations/23289807http://purl.uniprot.org/core/title"Gene-gene interactions of CFH and LOC387715/ARMS2 with Korean exudative age-related macular degeneration patients."xsd:string
http://purl.uniprot.org/citations/23289807http://purl.uniprot.org/core/volume"34"xsd:string
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