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http://purl.uniprot.org/citations/26129866http://www.w3.org/1999/02/22-rdf-syntax-ns#typehttp://purl.uniprot.org/core/Journal_Citation
http://purl.uniprot.org/citations/26129866http://www.w3.org/2000/01/rdf-schema#comment"

Objective

Genome-wide association studies (GWAS) of gastric cancer have reported differences in single-nucleotide polymorphism (SNP) associations for tumour subtypes, particularly when divided by location into the gastric cardia versus the non-cardia.

Design

Here we present results for a GWAS using 2350 East Asian gastric cancer cases divided as 1189 gastric cardia and 1027 gastric non-cardia cases and 2708 controls. We also included up to 3042 cardia cases, 4359 non-cardia cases and 7548 controls for replication from two Chinese studies and one Korean study. From the GWAS, we selected 12 top SNPs for each gastric cancer subtype, 4 top SNPs for total gastric cancer and 1 SNP in MUC1 for replication testing.

Results

We observed genome-wide significant associations for rs10074991 in PRKAA1 at 5p13.1 for cardia (p=7.36×10(-12)) and non-cardia cancers (p=2.42×10(-23)) with per allele OR (95% CI) for the combined endpoint of 0.80 (0.77 to 0.83). At 6p21.1, rs2294693 near UNC5CL was significantly associated with gastric non-cardia cancer risk (p=2.50×10(-8)), with OR (95% CI) of 1.18 (1.12 to 1.26), but there was only a nominal association for cardia cancer (p=1.47×10(-2)). We also confirmed a previously reported association for rs4072037 in MUC1 with p=6.59×10(-8) for total gastric cancer and similar estimates for cardia and non-cardia cancers. Three SNPs in PSCA previously reported to be associated with gastric non-cardia cancer showed no apparent association for cardia cancer.

Conclusions

Our results suggest that associations for SNPs with gastric cancer show some different results by tumour location in the stomach."xsd:string
http://purl.uniprot.org/citations/26129866http://purl.org/dc/terms/identifier"doi:10.1136/gutjnl-2015-309340"xsd:string
http://purl.uniprot.org/citations/26129866http://purl.uniprot.org/core/author"Chang J."xsd:string
http://purl.uniprot.org/citations/26129866http://purl.uniprot.org/core/author"Chung C."xsd:string
http://purl.uniprot.org/citations/26129866http://purl.uniprot.org/core/author"Han Y."xsd:string
http://purl.uniprot.org/citations/26129866http://purl.uniprot.org/core/author"Huang J."xsd:string
http://purl.uniprot.org/citations/26129866http://purl.uniprot.org/core/author"Kim H.S."xsd:string
http://purl.uniprot.org/citations/26129866http://purl.uniprot.org/core/author"Lin D."xsd:string
http://purl.uniprot.org/citations/26129866http://purl.uniprot.org/core/author"Song X."xsd:string
http://purl.uniprot.org/citations/26129866http://purl.uniprot.org/core/author"Wang C."xsd:string
http://purl.uniprot.org/citations/26129866http://purl.uniprot.org/core/author"Zhang P."xsd:string
http://purl.uniprot.org/citations/26129866http://purl.uniprot.org/core/author"Wang Z."xsd:string
http://purl.uniprot.org/citations/26129866http://purl.uniprot.org/core/author"Zheng W."xsd:string
http://purl.uniprot.org/citations/26129866http://purl.uniprot.org/core/author"Wei L."xsd:string
http://purl.uniprot.org/citations/26129866http://purl.uniprot.org/core/author"Yuan J.M."xsd:string
http://purl.uniprot.org/citations/26129866http://purl.uniprot.org/core/author"Yeager M."xsd:string
http://purl.uniprot.org/citations/26129866http://purl.uniprot.org/core/author"Wu C."xsd:string
http://purl.uniprot.org/citations/26129866http://purl.uniprot.org/core/author"Song K."xsd:string
http://purl.uniprot.org/citations/26129866http://purl.uniprot.org/core/author"Wu M.J."xsd:string
http://purl.uniprot.org/citations/26129866http://purl.uniprot.org/core/author"Chanock S.J."xsd:string
http://purl.uniprot.org/citations/26129866http://purl.uniprot.org/core/author"Hu N."xsd:string
http://purl.uniprot.org/citations/26129866http://purl.uniprot.org/core/author"Hong M."xsd:string
http://purl.uniprot.org/citations/26129866http://purl.uniprot.org/core/author"Tan W."xsd:string
http://purl.uniprot.org/citations/26129866http://purl.uniprot.org/core/author"Mao Y.M."xsd:string
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