http://purl.uniprot.org/citations/28864470 | http://www.w3.org/1999/02/22-rdf-syntax-ns#type | http://purl.uniprot.org/core/Journal_Citation |
http://purl.uniprot.org/citations/28864470 | http://www.w3.org/2000/01/rdf-schema#comment | "Plants have significantly more transcription factor (TF) families than animals and fungi, and plant TF families tend to contain more genes; these expansions are linked to adaptation to environmental stressors. Many TF family members bind to similar or identical sequence motifs, such as G-boxes (CACGTG), so it is difficult to predict regulatory relationships. We determined that the flanking sequences near G-boxes help determine in vitro specificity but that this is insufficient to predict the transcription pattern of genes near G-boxes. Therefore, we constructed a gene regulatory network that identifies the set of bZIPs and bHLHs that are most predictive of the expression of genes downstream of perfect G-boxes. This network accurately predicts transcriptional patterns and reconstructs known regulatory subnetworks. Finally, we present Ara-BOX-cis (araboxcis.org), a Web site that provides interactive visualizations of the G-box regulatory network, a useful resource for generating predictions for gene regulatory relations."xsd:string |
http://purl.uniprot.org/citations/28864470 | http://purl.org/dc/terms/identifier | "doi:10.1104/pp.17.01086"xsd:string |
http://purl.uniprot.org/citations/28864470 | http://purl.uniprot.org/core/author | "Biswas S."xsd:string |
http://purl.uniprot.org/citations/28864470 | http://purl.uniprot.org/core/author | "Brestovitsky A."xsd:string |
http://purl.uniprot.org/citations/28864470 | http://purl.uniprot.org/core/author | "Jaeger K.E."xsd:string |
http://purl.uniprot.org/citations/28864470 | http://purl.uniprot.org/core/author | "Wigge P.A."xsd:string |
http://purl.uniprot.org/citations/28864470 | http://purl.uniprot.org/core/author | "Box M.S."xsd:string |
http://purl.uniprot.org/citations/28864470 | http://purl.uniprot.org/core/author | "Charoensawan V."xsd:string |
http://purl.uniprot.org/citations/28864470 | http://purl.uniprot.org/core/author | "Cortijo S."xsd:string |
http://purl.uniprot.org/citations/28864470 | http://purl.uniprot.org/core/author | "Ezer D."xsd:string |
http://purl.uniprot.org/citations/28864470 | http://purl.uniprot.org/core/author | "Dickinson P."xsd:string |
http://purl.uniprot.org/citations/28864470 | http://purl.uniprot.org/core/author | "Shepherd S.J.K."xsd:string |
http://purl.uniprot.org/citations/28864470 | http://purl.uniprot.org/core/date | "2017"xsd:gYear |
http://purl.uniprot.org/citations/28864470 | http://purl.uniprot.org/core/name | "Plant Physiol"xsd:string |
http://purl.uniprot.org/citations/28864470 | http://purl.uniprot.org/core/pages | "628-640"xsd:string |
http://purl.uniprot.org/citations/28864470 | http://purl.uniprot.org/core/title | "The G-Box Transcriptional Regulatory Code in Arabidopsis."xsd:string |
http://purl.uniprot.org/citations/28864470 | http://purl.uniprot.org/core/volume | "175"xsd:string |
http://purl.uniprot.org/citations/28864470 | http://www.w3.org/2004/02/skos/core#exactMatch | http://purl.uniprot.org/pubmed/28864470 |
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