http://purl.uniprot.org/citations/29846646 | http://www.w3.org/1999/02/22-rdf-syntax-ns#type | http://purl.uniprot.org/core/Journal_Citation |
http://purl.uniprot.org/citations/29846646 | http://www.w3.org/2000/01/rdf-schema#comment | "ContextEpigenetics may contribute to sex-specific differences in human liver metabolism.ObjectiveTo study the impact of sex on DNA methylation and gene expression in human liver.Design/settingCross-sectional, Kuopio Obesity Surgery Study.Participants/interventionWe analyzed DNA methylation with the Infinium HumanMethylation450 BeadChip in liver of an obese population (34 males, 61 females). Females had a higher high-density lipoprotein (HDL)-cholesterol levels compared with males. Gene expression was measured with the HumanHT-12 Expression BeadChip in a subset of 42 participants.ResultsFemales displayed higher average methylation in the X-chromosome, whereas males presented higher methylation in autosomes. We found 9455 CpG sites in the X-chromosome and 33,205 sites in autosomes with significant methylation differences in liver between sexes (q < 0.05). When comparing our findings with published studies, 95% of the sex-specific differences in liver methylation in the X-chromosome were also found in pancreatic islets and brain, and 26 autosomal sites showed sex-specific methylation differences in the liver as well as in other human tissues. Furthermore, this sex-specific methylation profile in liver was associated with hepatic gene expression changes between males and females. Notably, females showed higher HDL-cholesterol levels, which were associated with higher KDM6A expression and epigenetic differences in human liver. Accordingly, silencing of KDM6A in cultured liver cells reduced HDL-cholesterol levels and APOA1 expression, which is a major component of HDL particles.ConclusionsHuman liver has a sex-specific methylation profile in both the X-chromosome and autosomes, which associates with hepatic gene expression changes and HDL-cholesterol. We identified KDM6A as a novel target that regulates HDL-cholesterol levels."xsd:string |
http://purl.uniprot.org/citations/29846646 | http://purl.org/dc/terms/identifier | "doi:10.1210/jc.2018-00423"xsd:string |
http://purl.uniprot.org/citations/29846646 | http://purl.uniprot.org/core/author | "Ling C."xsd:string |
http://purl.uniprot.org/citations/29846646 | http://purl.uniprot.org/core/author | "Pihlajamaki J."xsd:string |
http://purl.uniprot.org/citations/29846646 | http://purl.uniprot.org/core/author | "de Mello V.D."xsd:string |
http://purl.uniprot.org/citations/29846646 | http://purl.uniprot.org/core/author | "Garcia-Calzon S."xsd:string |
http://purl.uniprot.org/citations/29846646 | http://purl.uniprot.org/core/author | "Perfilyev A."xsd:string |
http://purl.uniprot.org/citations/29846646 | http://purl.uniprot.org/core/date | "2018"xsd:gYear |
http://purl.uniprot.org/citations/29846646 | http://purl.uniprot.org/core/name | "J Clin Endocrinol Metab"xsd:string |
http://purl.uniprot.org/citations/29846646 | http://purl.uniprot.org/core/pages | "4395-4408"xsd:string |
http://purl.uniprot.org/citations/29846646 | http://purl.uniprot.org/core/title | "Sex Differences in the Methylome and Transcriptome of the Human Liver and Circulating HDL-Cholesterol Levels."xsd:string |
http://purl.uniprot.org/citations/29846646 | http://purl.uniprot.org/core/volume | "103"xsd:string |
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