RDF/XMLNTriplesTurtleShow queryShare
SubjectPredicateObject
http://purl.uniprot.org/citations/30286803http://www.w3.org/1999/02/22-rdf-syntax-ns#typehttp://purl.uniprot.org/core/Journal_Citation
http://purl.uniprot.org/citations/30286803http://www.w3.org/1999/02/22-rdf-syntax-ns#typehttp://purl.uniprot.org/core/Journal_Citation
http://purl.uniprot.org/citations/30286803http://www.w3.org/1999/02/22-rdf-syntax-ns#typehttp://purl.uniprot.org/core/Journal_Citation
http://purl.uniprot.org/citations/30286803http://www.w3.org/2000/01/rdf-schema#comment"SKESA is a DeBruijn graph-based de-novo assembler designed for assembling reads of microbial genomes sequenced using Illumina. Comparison with SPAdes and MegaHit shows that SKESA produces assemblies that have high sequence quality and contiguity, handles low-level contamination in reads, is fast, and produces an identical assembly for the same input when assembled multiple times with the same or different compute resources. SKESA has been used for assembling over 272,000 read sets in the Sequence Read Archive at NCBI and for real-time pathogen detection. Source code for SKESA is freely available at https://github.com/ncbi/SKESA/releases ."xsd:string
http://purl.uniprot.org/citations/30286803http://purl.org/dc/terms/identifier"doi:10.1186/s13059-018-1540-z"xsd:string
http://purl.uniprot.org/citations/30286803http://purl.org/dc/terms/identifier"doi:10.1186/s13059-018-1540-z"xsd:string
http://purl.uniprot.org/citations/30286803http://purl.uniprot.org/core/author"Agarwala R."xsd:string
http://purl.uniprot.org/citations/30286803http://purl.uniprot.org/core/author"Agarwala R."xsd:string
http://purl.uniprot.org/citations/30286803http://purl.uniprot.org/core/author"Agarwala R."xsd:string
http://purl.uniprot.org/citations/30286803http://purl.uniprot.org/core/author"Lipman D.J."xsd:string
http://purl.uniprot.org/citations/30286803http://purl.uniprot.org/core/author"Lipman D.J."xsd:string
http://purl.uniprot.org/citations/30286803http://purl.uniprot.org/core/author"Lipman D.J."xsd:string
http://purl.uniprot.org/citations/30286803http://purl.uniprot.org/core/author"Souvorov A."xsd:string
http://purl.uniprot.org/citations/30286803http://purl.uniprot.org/core/author"Souvorov A."xsd:string
http://purl.uniprot.org/citations/30286803http://purl.uniprot.org/core/author"Souvorov A."xsd:string
http://purl.uniprot.org/citations/30286803http://purl.uniprot.org/core/date"2018"xsd:gYear
http://purl.uniprot.org/citations/30286803http://purl.uniprot.org/core/date"2018"xsd:gYear
http://purl.uniprot.org/citations/30286803http://purl.uniprot.org/core/date"2018"xsd:gYear
http://purl.uniprot.org/citations/30286803http://purl.uniprot.org/core/name"Genome Biol."xsd:string
http://purl.uniprot.org/citations/30286803http://purl.uniprot.org/core/name"Genome Biol."xsd:string
http://purl.uniprot.org/citations/30286803http://purl.uniprot.org/core/name"Genome Biol."xsd:string
http://purl.uniprot.org/citations/30286803http://purl.uniprot.org/core/pages"153"xsd:string
http://purl.uniprot.org/citations/30286803http://purl.uniprot.org/core/pages"153"xsd:string
http://purl.uniprot.org/citations/30286803http://purl.uniprot.org/core/pages"153-150"xsd:string
http://purl.uniprot.org/citations/30286803http://purl.uniprot.org/core/title"SKESA: strategic k-mer extension for scrupulous assemblies."xsd:string