| http://purl.uniprot.org/proteomes/UP000000663 | http://www.w3.org/1999/02/22-rdf-syntax-ns#type | http://purl.uniprot.org/core/Proteome |
| http://purl.uniprot.org/proteomes/UP000000663 | http://www.w3.org/1999/02/22-rdf-syntax-ns#type | http://purl.uniprot.org/core/Representative_Proteome |
| http://purl.uniprot.org/proteomes/UP000000663 | http://www.w3.org/2000/01/rdf-schema#comment | "A large part of the emitted methane is produced by methanogenic archaea and released through the gas vascular system of the rice plant. Rice Cluster I (RC-I) methanogens in the rice rhizosphere were found to play the key role in methane production from plant-derived carbon. They were identified as the predominant methanogens in rice paddy soils of geographically diverse regions. Several attempts have been made to isolate RC-I representatives in pure culture. Although isolation failed, one of these attempts with rice paddy soil as the inoculum resulted in the methanogenic consortium MRE50, in which RC-I methanogens constituted the only archaeal components. The complete genome sequence of a single RC-I representative was unambiguously reconstructed. The genome of the Uncultured methanogenic archaeon RC-I is made up of a single circular chromosome of 3,179,916 base pairs with 3103 coding sequences. The central energy metabolism of RC-I is H2/CO2-dependent methanogenesis. It can use formate and formaldehyde for methanogenic growth. It encodes only an incomplete methanol-coenzyme M methyltransferase system. It appears to use the Embden-Meyerhof-Parnas pathway for carbohydrate metabolism, thus involving bacterial-type enzymes not yet identified in archaea. The biosynthetic pathways for all amino acids except glutamate appear to be complete. Two mechanisms for nitrogen acquisition exist besides glutamate uptake: ammonium assimilation (glutamine synthetase, glutamate synthase and glutamate dehydrogenase) and dinitrogen fixation (nitrogenase). Sulfur assimilation is predicted to occur thanks to the reduction of sulfate to sulfide."xsd:string |
| http://purl.uniprot.org/proteomes/UP000000663 | http://www.w3.org/2000/01/rdf-schema#seeAlso | http://purl.uniprot.org/proteomes/UP000000663#assembly |
| http://purl.uniprot.org/proteomes/UP000000663 | http://www.w3.org/2000/01/rdf-schema#seeAlso | http://purl.uniprot.org/proteomes/UP000000663#source |
| http://purl.uniprot.org/proteomes/UP000000663 | http://purl.uniprot.org/core/organism | http://purl.uniprot.org/taxonomy/351160 |
| http://purl.uniprot.org/proteomes/UP000000663 | http://purl.uniprot.org/core/citation | http://purl.uniprot.org/citations/16857943 |
| http://purl.uniprot.org/proteomes/UP000000663 | http://www.w3.org/2004/02/skos/core#closeMatch | http://purl.uniprot.org/proteomes/UP000000663#cpd |
| http://purl.uniprot.org/proteomes/UP000000663 | http://purl.org/dc/terms/modified | "2023-11-20"xsd:date |
| http://purl.uniprot.org/proteomes/UP000000663 | http://www.w3.org/2004/02/skos/core#narrower | http://purl.uniprot.org/proteomes/UP000000663#Chromosome |
| http://purl.uniprot.org/proteomes/UP000000663 | http://busco.ezlab.org/schema#has_score | http://purl.uniprot.org/proteomes/UP000000663#busco |
| http://purl.uniprot.org/proteomes/UP000000663 | http://purl.uniprot.org/core/strain | http://purl.uniprot.org/proteomes/UP000000663#DSM%2022066%20%2F%20NBRC%20105507%20%2F%20MRE50 |
| http://purl.uniprot.org/uniprot/Q0W4G6#attribution-57873742FF7275C98E5CC9E64BCEEE29 | http://purl.uniprot.org/core/source | http://purl.uniprot.org/proteomes/UP000000663 |
| http://purl.uniprot.org/uniprot/Q0W714#attribution-57873742FF7275C98E5CC9E64BCEEE29 | http://purl.uniprot.org/core/source | http://purl.uniprot.org/proteomes/UP000000663 |
| http://purl.uniprot.org/uniprot/Q0W602#attribution-57873742FF7275C98E5CC9E64BCEEE29 | http://purl.uniprot.org/core/source | http://purl.uniprot.org/proteomes/UP000000663 |
| http://purl.uniprot.org/uniprot/Q0W0U8#attribution-57873742FF7275C98E5CC9E64BCEEE29 | http://purl.uniprot.org/core/source | http://purl.uniprot.org/proteomes/UP000000663 |
| http://purl.uniprot.org/uniprot/Q0W601#attribution-57873742FF7275C98E5CC9E64BCEEE29 | http://purl.uniprot.org/core/source | http://purl.uniprot.org/proteomes/UP000000663 |
| http://purl.uniprot.org/uniprot/Q0W2F3#attribution-57873742FF7275C98E5CC9E64BCEEE29 | http://purl.uniprot.org/core/source | http://purl.uniprot.org/proteomes/UP000000663 |
| http://purl.uniprot.org/uniprot/Q0W837#attribution-57873742FF7275C98E5CC9E64BCEEE29 | http://purl.uniprot.org/core/source | http://purl.uniprot.org/proteomes/UP000000663 |
| http://purl.uniprot.org/uniprot/Q0W0Q7#attribution-57873742FF7275C98E5CC9E64BCEEE29 | http://purl.uniprot.org/core/source | http://purl.uniprot.org/proteomes/UP000000663 |
| http://purl.uniprot.org/uniprot/Q0W147#attribution-57873742FF7275C98E5CC9E64BCEEE29 | http://purl.uniprot.org/core/source | http://purl.uniprot.org/proteomes/UP000000663 |
| http://purl.uniprot.org/uniprot/Q0W0V8#attribution-57873742FF7275C98E5CC9E64BCEEE29 | http://purl.uniprot.org/core/source | http://purl.uniprot.org/proteomes/UP000000663 |
| http://purl.uniprot.org/uniprot/Q0W207#attribution-57873742FF7275C98E5CC9E64BCEEE29 | http://purl.uniprot.org/core/source | http://purl.uniprot.org/proteomes/UP000000663 |
| http://purl.uniprot.org/uniprot/Q0W0U9#attribution-57873742FF7275C98E5CC9E64BCEEE29 | http://purl.uniprot.org/core/source | http://purl.uniprot.org/proteomes/UP000000663 |
| http://purl.uniprot.org/uniprot/Q0W4A1#attribution-57873742FF7275C98E5CC9E64BCEEE29 | http://purl.uniprot.org/core/source | http://purl.uniprot.org/proteomes/UP000000663 |