| http://purl.uniprot.org/proteomes/UP000008525 | http://www.w3.org/1999/02/22-rdf-syntax-ns#type | http://purl.uniprot.org/core/Proteome |
| http://purl.uniprot.org/proteomes/UP000008525 | http://www.w3.org/2000/01/rdf-schema#comment | "Escherichia coli is a Gram-negative straight rod, which either uses peritrichous flagella for mobility or is nonmotile. It is a facultatively anaerobic chemoorganotroph capable of both respiratory and fermentative metabolism. E.coli serves a useful function in the body by suppressing the growth of harmful bacterial species and by synthesising appreciable amounts of vitamins. It is an important component of the biosphere. It colonizes the lower gut of animals and survives when released to the natural environment, allowing widespread dissemination to new hosts. Pathogenic E.coli strains are responsible for infection of the enteric, urinary, pulmonary and nervous systems. Comparison of 20 E.coli/Shigella strains shows the core genome to be about 2000 genes while the pan-genome has over 18,000 genes. There are multiple, striking integration hotspots that are conserved across the genomes, corresponding to regions of abundant and parallel insertions and deletions of genetic material. "xsd:string |
| http://purl.uniprot.org/proteomes/UP000008525 | http://www.w3.org/2000/01/rdf-schema#comment | "E. coli W, ATCC 9637, was originally isolated from the soil of a cemetery near Rutgers University around 1943 by Selman A. Waksman. The strain was termed Waksman's strain or W strain because it showed the highest sensitivity to streptomycin compared to other isolated E. coli strains in Waksman's collection. It is one of only 4 strains designated as Risk Group 1 organisms in biological safety guidelines. It has a larger genome that K12, B or C strains (the other Risk Group 1 E.coli) and belongs to phylogroup B1 rather than A. It is more closely related to commensal strains than the other lab strains, grows faster than K-12 and on a much broader range of carbon sources, and is the only safe E. coli strain which can utilize sucrose as a carbon source. It exhibits many other industrially desirable traits, including fast growth, stress tolerance and growth to high cell densities (adapted from PMID 21208457). A second proteome has been published in 2012, which is in excellent agreement with the first proteome with one exception: the G segment of bacteriophage Mu is in opposite orientations (adapted from PMID 22075923)."xsd:string |
| http://purl.uniprot.org/proteomes/UP000008525 | http://www.w3.org/2000/01/rdf-schema#seeAlso | http://purl.uniprot.org/proteomes/UP000008525#assembly |
| http://purl.uniprot.org/proteomes/UP000008525 | http://www.w3.org/2000/01/rdf-schema#seeAlso | http://purl.uniprot.org/proteomes/UP000008525#source |
| http://purl.uniprot.org/proteomes/UP000008525 | http://purl.uniprot.org/core/organism | http://purl.uniprot.org/taxonomy/566546 |
| http://purl.uniprot.org/proteomes/UP000008525 | http://purl.uniprot.org/core/citation | http://purl.uniprot.org/citations/21208457 |
| http://purl.uniprot.org/proteomes/UP000008525 | http://www.w3.org/2004/02/skos/core#closeMatch | http://purl.uniprot.org/proteomes/UP000008525#cpd |
| http://purl.uniprot.org/proteomes/UP000008525 | http://purl.org/dc/terms/modified | "2023-01-26"xsd:date |
| http://purl.uniprot.org/proteomes/UP000008525 | http://www.w3.org/2004/02/skos/core#narrower | http://purl.uniprot.org/proteomes/UP000008525#Chromosome |
| http://purl.uniprot.org/proteomes/UP000008525 | http://www.w3.org/2004/02/skos/core#narrower | http://purl.uniprot.org/proteomes/UP000008525#Plasmid%20pRK1 |
| http://purl.uniprot.org/proteomes/UP000008525 | http://www.w3.org/2004/02/skos/core#narrower | http://purl.uniprot.org/proteomes/UP000008525#Plasmid%20pRK2 |
| http://purl.uniprot.org/proteomes/UP000008525 | http://busco.ezlab.org/schema#has_score | http://purl.uniprot.org/proteomes/UP000008525#busco |
| http://purl.uniprot.org/proteomes/UP000008525 | http://purl.uniprot.org/core/panproteome | http://purl.uniprot.org/proteomes/UP000000625 |
| http://purl.uniprot.org/proteomes/UP000008525 | http://purl.uniprot.org/core/strain | http://purl.uniprot.org/proteomes/UP000008525#ATCC%209637%20%2F%20CCM%202024%20%2F%20DSM%201116%20%2F%20LMG%2011080%20%2F%20NBRC%2013500%20%2F%20NCIMB%208666%20%2F%20NRRL%20B-766%20%2F%20W |
| http://purl.uniprot.org/uniprot/E0J253#attribution-E5C1BCDBFC6ACF9CC2E74390C365ED96 | http://purl.uniprot.org/core/source | http://purl.uniprot.org/proteomes/UP000008525 |
| http://purl.uniprot.org/uniprot/E0IVS7#attribution-E5C1BCDBFC6ACF9CC2E74390C365ED96 | http://purl.uniprot.org/core/source | http://purl.uniprot.org/proteomes/UP000008525 |
| http://purl.uniprot.org/uniprot/E0J2R2#attribution-E5C1BCDBFC6ACF9CC2E74390C365ED96 | http://purl.uniprot.org/core/source | http://purl.uniprot.org/proteomes/UP000008525 |
| http://purl.uniprot.org/uniprot/E0J437#attribution-E5C1BCDBFC6ACF9CC2E74390C365ED96 | http://purl.uniprot.org/core/source | http://purl.uniprot.org/proteomes/UP000008525 |
| http://purl.uniprot.org/uniprot/E0IWB5#attribution-E5C1BCDBFC6ACF9CC2E74390C365ED96 | http://purl.uniprot.org/core/source | http://purl.uniprot.org/proteomes/UP000008525 |
| http://purl.uniprot.org/uniprot/E0IXZ2#attribution-E5C1BCDBFC6ACF9CC2E74390C365ED96 | http://purl.uniprot.org/core/source | http://purl.uniprot.org/proteomes/UP000008525 |
| http://purl.uniprot.org/uniprot/E0IWX3#attribution-E5C1BCDBFC6ACF9CC2E74390C365ED96 | http://purl.uniprot.org/core/source | http://purl.uniprot.org/proteomes/UP000008525 |
| http://purl.uniprot.org/uniprot/E0IZ50#attribution-E5C1BCDBFC6ACF9CC2E74390C365ED96 | http://purl.uniprot.org/core/source | http://purl.uniprot.org/proteomes/UP000008525 |
| http://purl.uniprot.org/uniprot/E0J4E1#attribution-E5C1BCDBFC6ACF9CC2E74390C365ED96 | http://purl.uniprot.org/core/source | http://purl.uniprot.org/proteomes/UP000008525 |
| http://purl.uniprot.org/uniprot/E0J138#attribution-E5C1BCDBFC6ACF9CC2E74390C365ED96 | http://purl.uniprot.org/core/source | http://purl.uniprot.org/proteomes/UP000008525 |